RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 RILPQ96NA2 401 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 TMEM121Q9BTD3 319 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 SLC38A7Q9NVC3 462 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 RSL24D1Q9UHA3 163 aaKnown RBP10.56□□□□□ -0.72
LINC00488-201ENST00000494582 PHLPP1O60346 1717 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 DOT1LQ8TEK3 1739 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 CYP3A7-CYP3A51PA0A087WV96 503 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 KLF11O14901 512 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 WDR46O15213 610 aaKnown RBP10.56□□□□□ -0.72
LINC00488-201ENST00000494582 SPTLC1O15269 473 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 FBXO21O94952 628 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 IFNB1P01574 187 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 SERPINA6P08185 405 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 CYP3A7P24462 503 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 MRPS5P82675 430 aaKnown RBP10.56□□□□□ -0.72
LINC00488-201ENST00000494582 TMPRSS15P98073 1019 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 CREB5Q02930 508 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 PTK7Q13308 1070 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 CHI3L2Q15782 390 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 CNGA3Q16281 694 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 PARP10Q53GL7 1025 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 CCDC80Q76M96 950 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 RHPN2Q8IUC4 686 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 MCOLN2Q8IZK6 566 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 PQLC1Q8N2U9 271 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 OGFOD1Q8N543 542 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 ALKBH8Q96BT7 664 aaKnown RBP10.56□□□□□ -0.72
LINC00488-201ENST00000494582 ACSF2Q96CM8 615 aaPredicted RBP10.56□□□□□ -0.72
LINC00488-201ENST00000494582 C7orf26Q96N11 449 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 RANBP9Q96S59 729 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 WWP1Q9H0M0 922 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 PLGRKTQ9HBL7 147 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 GINM1Q9NU53 330 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 RRN3Q9NYV6 651 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 VAV3Q9UKW4 847 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 USTQ9Y2C2 406 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 FARP1Q9Y4F1 1045 aaPredicted RBP10.56□□□□□ -0.72
LINC00488-201ENST00000494582 KAT6AQ92794 2004 aa10.56□□□□□ -0.72
LINC00488-201ENST00000494582 TOP3BO95985 862 aaKnown RBP10.55□□□□□ -0.72
LINC00488-201ENST00000494582 ZBED1O96006 694 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 ITGAXP20702 1163 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 NFKBIAP25963 317 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 VAMP7P51809 220 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 NR1H2P55055 460 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 GDF10P55107 478 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 ITPRIPL1Q6GPH6 555 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 ATG14Q6ZNE5 492 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 ANO5Q75V66 913 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 TICAM1Q8IUC6 712 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 PASD1Q8IV76 773 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 LILRA2Q8N149 483 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 CRYGNQ8WXF5 182 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 EIF2AK1Q9BQI3 630 aaKnown RBP10.55□□□□□ -0.72
LINC00488-201ENST00000494582 HEPHQ9BQS7 1158 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 CBWD1Q9BRT8 395 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 GNEQ9Y223 722 aaKnown RBP10.55□□□□□ -0.72
LINC00488-201ENST00000494582 COQ6Q9Y2Z9 468 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 TMED5Q9Y3A6 229 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 LSM1O15116 133 aaKnown RBP10.55□□□□□ -0.72
LINC00488-201ENST00000494582 PROSCO94903 275 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 CFHP08603 1231 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 SNHG28P0DPA3 235 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 CPA3P15088 417 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 GAP43P17677 238 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 SSTR3P32745 418 aaPredicted RBP10.55□□□□□ -0.72
LINC00488-201ENST00000494582 PHKA2P46019 1235 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 CDK9P50750 372 aaKnown RBP10.55□□□□□ -0.72
LINC00488-201ENST00000494582 HDAC4P56524 1084 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 SLC15A2Q16348 729 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 BCL2A1Q16548 175 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 DCAF6Q58WW2 860 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 MFSD7Q6UXD7 560 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 KATNAL2Q8IYT4 538 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 RTKN2Q8IZC4 609 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 DEFB107AQ8IZN7 70 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 ATP11CQ8NB49 1132 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 ACTRT2Q8TDY3 377 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 TFB1MQ8WVM0 346 aaKnown RBP10.55□□□□□ -0.72
LINC00488-201ENST00000494582 CPT1BQ92523 772 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 AGAP3Q96P47 875 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 SLC2A11Q9BYW1 496 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 OSBPL6Q9BZF3 934 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 PPCSQ9HAB8 311 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 SAE1Q9UBE0 346 aaPredicted RBP10.55□□□□□ -0.72
LINC00488-201ENST00000494582 FETUBQ9UGM5 382 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 SHOC2Q9UQ13 582 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 SSX2IPQ9Y2D8 614 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 RNF11Q9Y3C5 154 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 FAM32AQ9Y421 112 aaKnown RBP10.55□□□□□ -0.72
LINC00488-201ENST00000494582 CDK5RAP2Q96SN8 1893 aa10.55□□□□□ -0.72
LINC00488-201ENST00000494582 LYPLA1O75608 230 aaPredicted RBP10.54□□□□□ -0.72
LINC00488-201ENST00000494582 TMEM63AO94886 807 aa10.54□□□□□ -0.72
LINC00488-201ENST00000494582 FAM58BPP0C7Q3 252 aa10.54□□□□□ -0.72
LINC00488-201ENST00000494582 UNGP13051 313 aaPredicted RBP10.54□□□□□ -0.72
LINC00488-201ENST00000494582 NRLP54845 237 aa10.54□□□□□ -0.72
LINC00488-201ENST00000494582 PTP4A2Q12974 167 aa10.54□□□□□ -0.72
LINC00488-201ENST00000494582 NFX1Q12986 1120 aaKnown RBP10.54□□□□□ -0.72
LINC00488-201ENST00000494582 ITGA7Q13683 1181 aa10.54□□□□□ -0.72
LINC00488-201ENST00000494582 OASLQ15646 514 aaKnown RBP10.54□□□□□ -0.72
LINC00488-201ENST00000494582 ERFEQ4G0M1 354 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 898 ms