RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 C16orf87Q6PH81 154 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.28□□□□□ -1.24
SNX13-210ENST00000494402 ADGRA1Q86SQ6 560 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 SP8Q8IXZ3 490 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 FRMD1Q8N878 549 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 C12orf50Q8NA57 414 aaPredicted RBP7.28□□□□□ -1.24
SNX13-210ENST00000494402 ZBTB44Q8NCP5 570 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 GIMAP7Q8NHV1 300 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 ZCCHC10Q8TBK6 192 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 PIWIL2Q8TC59 973 aaKnown RBP7.28□□□□□ -1.24
SNX13-210ENST00000494402 BRSK1Q8TDC3 778 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 CYFIP2Q96F07 1278 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 HIST1H2AHQ96KK5 128 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 PSMG3-AS1Q96PY0 264 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 HIST1H2AJQ99878 128 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 SPXQ9BT56 116 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 GPR62Q9BZJ7 368 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 PITHD1Q9GZP4 211 aaPredicted RBP7.28□□□□□ -1.24
SNX13-210ENST00000494402 GALNT8Q9NY28 637 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 GULP1Q9UBP9 304 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 ZDHHC8Q9ULC8 765 aa7.28□□□□□ -1.24
SNX13-210ENST00000494402 NPIPB15A6NHN6 443 aaPredicted RBP7.27□□□□□ -1.25
SNX13-210ENST00000494402 F2RL2O00254 374 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 TP73O15350 636 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 TIAF1O95411 115 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 ANXA6P08133 673 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 SPARCP09486 303 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 MYBL1P10243 752 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 CKBP12277 381 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 BTF3P20290 206 aaKnown RBP7.27□□□□□ -1.25
SNX13-210ENST00000494402 IL10P22301 178 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 SERPINA4P29622 427 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 ECHS1P30084 290 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 HOXA11P31270 313 aaPredicted RBP7.27□□□□□ -1.25
SNX13-210ENST00000494402 PSMC4P43686 418 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 SLC12A3P55017 1021 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 PSMC6P62333 389 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 NOLC1Q14978 699 aaKnown RBP eCLIP7.27□□□□□ -1.25
SNX13-210ENST00000494402 NTRK2Q16620 822 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 EMC4Q5J8M3 183 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 ADALQ6DHV7 355 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 TMEM132EQ6IEE7 984 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 RINT1Q6NUQ1 792 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 FAM129CQ86XR2 697 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 RASGRP3Q8IV61 690 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.27□□□□□ -1.25
SNX13-210ENST00000494402 RBM12BQ8IXT5 1001 aaKnown RBP7.27□□□□□ -1.25
SNX13-210ENST00000494402 C2CD4AQ8NCU7 369 aaPredicted RBP7.27□□□□□ -1.25
SNX13-210ENST00000494402 CTCFLQ8NI51 663 aaPredicted RBP7.27□□□□□ -1.25
SNX13-210ENST00000494402 CCHCR1Q8TD31 782 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 CTNNBL1Q8WYA6 563 aaPredicted RBP7.27□□□□□ -1.25
SNX13-210ENST00000494402 NCSTNQ92542 709 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 SPSB4Q96A44 273 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 C1orf43Q9BWL3 253 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 PAPOLBQ9NRJ5 636 aaKnown RBP7.27□□□□□ -1.25
SNX13-210ENST00000494402 PPP1R14DQ9NXH3 145 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.27□□□□□ -1.25
SNX13-210ENST00000494402 DNAJB9Q9UBS3 223 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 FTSJ1Q9UET6 329 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 STARD13Q9Y3M8 1113 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 RPTORQ8N122 1335 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 KDM3AQ9Y4C1 1321 aa7.27□□□□□ -1.25
SNX13-210ENST00000494402 A0A0A6YYJ9 748 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 HNRNPRO43390 633 aaKnown RBP7.26□□□□□ -1.25
SNX13-210ENST00000494402 KIF5CO60282 957 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 PHF2O75151 1096 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 PPP6R2O75170 966 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 PALMO75781 387 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 FUCA1P04066 466 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 SP100P23497 879 aaPredicted RBP7.26□□□□□ -1.25
SNX13-210ENST00000494402 ACVR2AP27037 513 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 GARSP41250 739 aaKnown RBP7.26□□□□□ -1.25
SNX13-210ENST00000494402 SSR1P43307 286 aaKnown RBP7.26□□□□□ -1.25
SNX13-210ENST00000494402 HSD17B4P51659 736 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 SLC26A5P58743 744 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 TEKQ02763 1124 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 AIMP2Q13155 320 aaKnown RBP7.26□□□□□ -1.25
SNX13-210ENST00000494402 SLC29A2Q14542 456 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 CRYMQ14894 314 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 ALG11Q2TAA5 492 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 C9orf152Q5JTZ5 239 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 DCAF12L1Q5VU92 463 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 LIPMQ5VYY2 423 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 CAVIN1Q6NZI2 390 aaKnown RBP7.26□□□□□ -1.25
SNX13-210ENST00000494402 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.26□□□□□ -1.25
SNX13-210ENST00000494402 IRF2BP1Q8IU81 584 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 TRIM48Q8IWZ4 208 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 ADGRF2Q8IZF7 708 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 IL17RDQ8NFM7 739 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 OR6J1Q8NGC5 347 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 SPATA20Q8TB22 786 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 SETD6Q8TBK2 473 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 PHOSPHO1Q8TCT1 267 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 PLEKHO2Q8TD55 490 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 CDCA5Q96FF9 252 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 MFSD14AQ96MC6 490 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 FOXP3Q9BZS1 431 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 NT5C3AQ9H0P0 336 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 ACSS3Q9H6R3 686 aa7.26□□□□□ -1.25
SNX13-210ENST00000494402 SNX15Q9NRS6 342 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms