RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 C2orf81A6NN90 581 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 PJA2O43164 708 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 CPA2P48052 419 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 LRRC74AQ0VAA2 488 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 OVGP1Q12889 678 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.83■□□□□ 0.77
COL27A1-207ENST00000494090 H2AFYO75367 372 aaKnown RBP19.83■□□□□ 0.77
COL27A1-207ENST00000494090 FBXO21O94952 628 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 MAPTP10636 758 aaKnown RBP19.83■□□□□ 0.77
COL27A1-207ENST00000494090 ETFBP38117 255 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 NEK2P51955 445 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 PRKCQQ04759 706 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 BFSP2Q13515 415 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 SLC15A2Q16348 729 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 SLC30A9Q6PML9 568 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 C4orf19Q8IY42 314 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 ILKAPQ9H0C8 392 aaPredicted RBP19.83■□□□□ 0.77
COL27A1-207ENST00000494090 SALL1Q9NSC2 1324 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 SUPT20HL2P0C7V6 817 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 RRM1P23921 792 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 TP53BP2Q13625 1128 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 CLEC16AQ2KHT3 1053 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 KBTBD12Q3ZCT8 623 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 CLEC4FQ8N1N0 589 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 NAT9Q9BTE0 207 aa19.83■□□□□ 0.77
COL27A1-207ENST00000494090 OTUD4Q01804 1114 aaKnown RBP19.83■□□□□ 0.76
COL27A1-207ENST00000494090 PCNX4Q63HM2 1172 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 SPOCD1Q6ZMY3 1216 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 SLC20A1Q8WUM9 679 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 TADA1Q96BN2 335 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 CCDC126Q96EE4 140 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 FAR2Q96K12 515 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 MTMR12Q9C0I1 747 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 DDIT4Q9NX09 232 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 SLC24A2Q9UI40 661 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 SUGP1Q8IWZ8 645 aaKnown RBP19.83■□□□□ 0.76
COL27A1-207ENST00000494090 FAM9CQ8IZT9 166 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 PCSK9Q8NBP7 692 aaKnown RBP19.83■□□□□ 0.76
COL27A1-207ENST00000494090 MTMR8Q96EF0 704 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 YIPF2Q9BWQ6 316 aa19.83■□□□□ 0.76
COL27A1-207ENST00000494090 ABI2Q9NYB9 513 aaPredicted RBP19.83■□□□□ 0.76
COL27A1-207ENST00000494090 ZBTB22O15209 634 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 ANXA11P50995 505 aaKnown RBP19.82■□□□□ 0.76
COL27A1-207ENST00000494090 POU4F1Q01851 419 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 NFIAQ12857 509 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 OTULINQ96BN8 352 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 H2AFY2Q9P0M6 372 aaPredicted RBP19.82■□□□□ 0.76
COL27A1-207ENST00000494090 PRG3Q9Y2Y8 225 aaPredicted RBP19.82■□□□□ 0.76
COL27A1-207ENST00000494090 F5H5T6 163 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 NKRFO15226 690 aaKnown RBP eCLIP19.82■□□□□ 0.764e-6■■■■□ 21.4
COL27A1-207ENST00000494090 FKBP9O95302 570 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 FKBP9P1Q75LS8 142 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 SAMD7Q7Z3H4 446 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 MRPS31Q92665 395 aaKnown RBP19.82■□□□□ 0.76
COL27A1-207ENST00000494090 TMX2Q9Y320 296 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 DCDC2CA8MYV0 355 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 VWA5AO00534 786 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 THPOP40225 353 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 RAP1GDS1P52306 607 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 TJAP1Q5JTD0 557 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 FAM117BQ6P1L5 589 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 SLC47A2Q86VL8 602 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 IFNEQ86WN2 208 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 GALNT4Q8N4A0 578 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 TAS1R2Q8TE23 839 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 SYNDIG1Q9H7V2 258 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 MPP6Q9NZW5 540 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 TRMT6Q9UJA5 497 aaKnown RBP19.82■□□□□ 0.76
COL27A1-207ENST00000494090 MEGF6O75095 1541 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 M0QYT0 321 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 AP1G2O75843 785 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 HSPA13P48723 471 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 IRX1P78414 480 aaPredicted RBP19.82■□□□□ 0.76
COL27A1-207ENST00000494090 KCNMA1Q12791 1236 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 SEZ6Q53EL9 994 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 FAXCQ5TGI0 409 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 AGAP9Q5VTM2 703 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 ARRDC4Q8NCT1 418 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 RFWD2Q8NHY2 731 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 FAM162AQ96A26 154 aa19.82■□□□□ 0.76
COL27A1-207ENST00000494090 TGM2P21980 687 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 PSMA3P25788 255 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 EARS2Q5JPH6 523 aaKnown RBP19.81■□□□□ 0.76
COL27A1-207ENST00000494090 EMILIN2Q9BXX0 1053 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 SDR42E2A6NKP2 422 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 DEAF1O75398 565 aaPredicted RBP19.81■□□□□ 0.76
COL27A1-207ENST00000494090 TCN1P20061 433 aaPredicted RBP19.81■□□□□ 0.76
COL27A1-207ENST00000494090 BACE1P56817 501 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 CYGBQ8WWM9 190 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 ADARB2Q9NS39 739 aaKnown RBP19.81■□□□□ 0.76
COL27A1-207ENST00000494090 STX5Q13190 355 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 TMEM119Q4V9L6 283 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 HS6ST3Q8IZP7 471 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 RPS6KL1Q9Y6S9 549 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 C2CD6Q53TS8 623 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 RPRD1AQ96P16 312 aaPredicted RBP19.81■□□□□ 0.76
COL27A1-207ENST00000494090 STN1Q9H668 368 aaKnown RBP19.81■□□□□ 0.76
COL27A1-207ENST00000494090 CYP3A43Q9HB55 503 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 CD248Q9HCU0 757 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 HAO1Q9UJM8 370 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms