RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 TFAMQ00059 246 aaKnown RBP8.69□□□□□ -1.02
HDAC6-234ENST00000493923 FAM160A1Q05DH4 1040 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 TNK2Q07912 1038 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 DMWDQ09019 674 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 BFSP1Q12934 665 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 MTAPQ13126 283 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 PLD1Q13393 1074 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 SETDB1Q15047 1291 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 STK38Q15208 465 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 SNCBQ16143 134 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 GPR158Q5T848 1215 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 NAIF1Q69YI7 327 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-234ENST00000493923 SLFN12LQ6IEE8 588 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 IQCEQ6IPM2 695 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 C11orf57Q6ZUT1 292 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-234ENST00000493923 CBWD2Q8IUF1 395 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 ARID3BQ8IVW6 561 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-234ENST00000493923 MFSD6LQ8IWD5 586 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 CD302Q8IX05 232 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 GRAMD1CQ8IYS0 662 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 ELMOD1Q8N336 334 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 AOPEPQ8N6M6 819 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 MAB21L3Q8N8X9 362 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 CCDC26Q8TAB7 109 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 NOC3LQ8WTT2 800 aaKnown RBP8.69□□□□□ -1.02
HDAC6-234ENST00000493923 P3H4Q92791 437 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 DNASE1L2Q92874 299 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 TATDN2Q93075 761 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 PSMG2Q969U7 264 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 ELMO3Q96BJ8 720 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 HVCN1Q96D96 273 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 CHFRQ96EP1 664 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 SHDQ96IW2 340 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 PKMYT1Q99640 499 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 SEPT5Q99719 369 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-234ENST00000493923 PI4K2AQ9BTU6 479 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 TRMT61BQ9BVS5 477 aaKnown RBP8.69□□□□□ -1.02
HDAC6-234ENST00000493923 NAA15Q9BXJ9 866 aaKnown RBP8.69□□□□□ -1.02
HDAC6-234ENST00000493923 MTMR12Q9C0I1 747 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 ATXN3LQ9H3M9 355 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 SLITRK6Q9H5Y7 841 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 OLFML3Q9NRN5 406 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 MYO1AQ9UBC5 1043 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 MAFFQ9ULX9 164 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 CCL26Q9Y258 94 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 PPP2R2CQ9Y2T4 447 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 CAPN7Q9Y6W3 813 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 PIAS3Q9Y6X2 628 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 PTPRDP23468 1912 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 MYOFQ9NZM1 2061 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 TARSL2A2RTX5 802 aaKnown RBP8.68□□□□□ -1.02
HDAC6-234ENST00000493923 CTAGE15A4D2H0 777 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 OTOL1A6NHN0 477 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-234ENST00000493923 SLC38A8A6NNN8 435 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 KPNA7A9QM74 516 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 LIN7AO14910 233 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-234ENST00000493923 SPTLC2O15270 562 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 TGFB1I1O43294 461 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 EXTL3O43909 919 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 KIF5CO60282 957 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 OPA1O60313 960 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 IL18RAPO95256 599 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 LMNAP02545 664 aaKnown RBP8.68□□□□□ -1.02
HDAC6-234ENST00000493923 F11P03951 625 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 CTAGE8P0CG41 777 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 GARTP22102 1010 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 CCNE1P24864 410 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 CYP2F1P24903 491 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 ALDH1A3P47895 512 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 EPHB3P54753 998 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 PFKPQ01813 784 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 DDR2Q16832 855 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 MGAT5BQ3V5L5 792 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 ISM2Q6H9L7 571 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 FOXR1Q6PIV2 292 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 Q6ZS52 159 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 EPM2AIP1Q7L775 607 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-234ENST00000493923 CTAGE6Q86UF2 777 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 CTAGE4Q8IX94 777 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 C3orf20Q8ND61 904 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 PLEKHO2Q8TD55 490 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 KCNG4Q8TDN1 519 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 NELL1Q92832 810 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 DHX58Q96C10 678 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 TSPAN18Q96SJ8 248 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 CRACR2AQ9BSW2 395 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 SLC46A2Q9BY10 475 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 BCO2Q9BYV7 579 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 OSBPL6Q9BZF3 934 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 TRIM9Q9C026 710 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 XPO4Q9C0E2 1151 aaKnown RBP8.68□□□□□ -1.02
HDAC6-234ENST00000493923 BLZF1Q9H2G9 400 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 KBTBD4Q9NVX7 518 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 POLR3BQ9NW08 1133 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-234ENST00000493923 ABI2Q9NYB9 513 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-234ENST00000493923 RBAKQ9NYW8 714 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-234ENST00000493923 GTSE1Q9NYZ3 720 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 SEL1LQ9UBV2 794 aa8.68□□□□□ -1.02
HDAC6-234ENST00000493923 MYBPHLA2RUH7 354 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 ANTXRLA6NF34 631 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms