RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 SPATC1Q76KD6 591 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 NLRC3Q7RTR2 1065 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 TRAPPC11Q7Z392 1133 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 ZNF571Q7Z3V5 609 aaPredicted RBP7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 IRF2BP2Q7Z5L9 587 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 SERINC5Q86VE9 423 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 TAB3Q8N5C8 712 aaPredicted RBP7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 ARRDC4Q8NCT1 418 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 TRIM58Q8NG06 486 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 U2AF1L4Q8WU68 220 aaKnown RBP7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 SHC3Q92529 594 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 TAF4BQ92750 862 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 NAPGQ99747 312 aaPredicted RBP7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 AGPAT1Q99943 283 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 PDCL3Q9H2J4 239 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 PTCH2Q9Y6C5 1203 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 CDY2AQ9Y6F7 541 aa7.18□□□□□ -1.26
NCKAP1-207ENST00000493359 A0A0U1RQG5 324 aaPredicted RBP7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 FAM86C2PA6NEL3 165 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 SLC22A31A6NKX4 558 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 LACTBL1A8MY62 500 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 FOXN3O00409 490 aaPredicted RBP7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 PJA2O43164 708 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 CYP26A1O43174 497 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 CAND2O75155 1236 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 ASS1P00966 412 aaKnown RBP7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 ITGB3P05106 788 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 PGRP06401 933 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 NFICP08651 508 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 H2AFZP0C0S5 128 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 NME1P15531 152 aaKnown RBP7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 ATICP31939 592 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 THPOP40225 353 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 ARHGAP25P42331 645 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 SUZ12Q15022 739 aaKnown RBP7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 NAB2Q15742 525 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 ZNF667Q5HYK9 610 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 TAF3Q5VWG9 929 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 TWF2Q6IBS0 349 aaKnown RBP7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 SPOPLQ6IQ16 392 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 ALKBH5Q6P6C2 394 aaKnown RBP7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 SCARA5Q6ZMJ2 495 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 SLCO4C1Q6ZQN7 724 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 H2AFVQ71UI9 128 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 KIAA0907Q7Z7F0 614 aaPredicted RBP7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 C12orf40Q86WS4 652 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 ZNF677Q86XU0 584 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 EFCAB13Q8IY85 973 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 TMEM192Q8IY95 271 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 FAM71AQ8IYT1 594 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 RPUSD2Q8IZ73 545 aaKnown RBP7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 SLC35F6Q8N357 371 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 KLHL23Q8NBE8 558 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 BEST2Q8NFU1 509 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 CTNNBL1Q8WYA6 563 aaPredicted RBP7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 KAT5Q92993 513 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 KLHDC7BQ96G42 594 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 FAM84AQ96KN4 292 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 SNX27Q96L92 541 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 KREMEN1Q96MU8 473 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 NOX5Q96PH1 765 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 APOL6Q9BWW8 343 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 GPR88Q9GZN0 384 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 DNAI2Q9GZS0 605 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 PLEKHA5Q9HAU0 1116 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 PCDH12Q9NPG4 1184 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 STARD7Q9NQZ5 370 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 RAD18Q9NS91 495 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 TRIM10Q9UDY6 481 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 ZMYM5Q9UJ78 669 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 ITGA11Q9UKX5 1188 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 DERAQ9Y315 318 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 STARD13Q9Y3M8 1113 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 C2CD2Q9Y426 696 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 PCDHB4Q9Y5E5 795 aa7.17□□□□□ -1.26
NCKAP1-207ENST00000493359 UQCRHLA0A096LP55 91 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 A0A0U1RQJ8 604 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 A0A1W2PQ45 241 aaPredicted RBP7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 A0A1W2PQY0 241 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 TMCO5BA8MYB1 307 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 M0R082 166 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 DDX3XO00571 662 aaKnown RBP eCLIP7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 ZNF263O14978 683 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 RECQL4O94761 1208 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 SGPL1O95470 568 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 ALBP02768 609 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 UQCRHP07919 91 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 EPXP11678 715 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 CYP11B1P15538 503 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 RAG1P15918 1043 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 SELPP16109 830 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 ZSCAN20P17040 1043 aaPredicted RBP7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 ATF7P17544 494 aaPredicted RBP7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 CD58P19256 250 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 POLR2BP30876 1174 aaKnown RBP7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 NOP2P46087 812 aaKnown RBP7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 TERF1P54274 439 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 MYL6P60660 151 aa7.16□□□□□ -1.26
NCKAP1-207ENST00000493359 TNNC1P63316 161 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms