RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 AP1G2O75843 785 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 TDGF1P13385 188 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 YWHAQP27348 245 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 PPP3CCP48454 512 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 SLC5A3P53794 718 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 ZXDBP98169 803 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 COBLL1Q53SF7 1204 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 DGKKQ5KSL6 1271 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 UNC93AQ86WB7 457 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 CRYBG2Q8N1P7 616 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 C12orf29Q8N999 325 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 ZBTB44Q8NCP5 570 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 SCAMP5Q8TAC9 235 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 SLC2A14Q8TDB8 520 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 OSCP1Q8WVF1 389 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 ATRIPQ8WXE1 791 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 TIGD1Q96MW7 591 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 SLITRK1Q96PX8 696 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 TWNKQ96RR1 684 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 RNF38Q9H0F5 515 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 FAM49BQ9NUQ9 324 aa19.13■□□□□ 0.65
PTPRU-207ENST00000492954 ZNF638Q14966 1978 aaKnown RBP19.12■□□□□ 0.65
PTPRU-207ENST00000492954 ANAPC1Q9H1A4 1944 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 TNFRSF10BO14763 440 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 RTN3O95197 1032 aaPredicted RBP19.12■□□□□ 0.65
PTPRU-207ENST00000492954 EPB41P11171 864 aaKnown RBP19.12■□□□□ 0.65
PTPRU-207ENST00000492954 TCF3P15923 654 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 PFKLP17858 780 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 GTF2H1P32780 548 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 CXCL12P48061 93 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 IFNAR2P48551 515 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 PMS1P54277 932 aaKnown RBP19.12■□□□□ 0.65
PTPRU-207ENST00000492954 INCA1Q0VD86 236 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 NAIF1Q69YI7 327 aaPredicted RBP19.12■□□□□ 0.65
PTPRU-207ENST00000492954 SPEM1Q8N4L4 309 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 CPA6Q8N4T0 437 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 SUMF1Q8NBK3 374 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 ZMIZ2Q8NF64 920 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 SEMA4DQ92854 862 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 FBXO32Q969P5 355 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 TSG101Q99816 390 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 SMOQ99835 787 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 NIF3L1Q9GZT8 377 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 ECT2Q9H8V3 914 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 C2orf42Q9NWW7 574 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 OTOGLQ3ZCN5 2332 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 FANCMQ8IYD8 2048 aa19.12■□□□□ 0.65
PTPRU-207ENST00000492954 ZNF292O60281 2723 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 LEFTY2O00292 366 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 BEST1O76090 585 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 OLFM2O95897 454 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 OAS1P00973 400 aaKnown RBP19.11■□□□□ 0.65
PTPRU-207ENST00000492954 CD58P19256 250 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 MAP3K7CLP57077 242 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 MCCD1P59942 119 aaPredicted RBP19.11■□□□□ 0.65
PTPRU-207ENST00000492954 SLC7A9P82251 487 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 PPP2R5DQ14738 602 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 EML3Q32P44 896 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 TMEM196Q5HYL7 178 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 KRT39Q6A163 491 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 ANKRD40Q6AI12 368 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 FSTL4Q6MZW2 842 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 ATP2A3Q93084 1043 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 FAM126AQ9BYI3 521 aaPredicted RBP19.11■□□□□ 0.65
PTPRU-207ENST00000492954 LINC00597Q9H2U6 94 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 CYP3A43Q9HB55 503 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 SMPD4Q9NXE4 827 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 HOOK1Q9UJC3 728 aaKnown RBP19.11■□□□□ 0.65
PTPRU-207ENST00000492954 CPQQ9Y646 472 aa19.11■□□□□ 0.65
PTPRU-207ENST00000492954 TRIM49BA6NDI0 452 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 TRDMT1O14717 391 aaKnown RBP19.1■□□□□ 0.65
PTPRU-207ENST00000492954 LILRB5O75023 590 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 ADORA2BP29275 332 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 GJA4P35212 333 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 MXI1P50539 228 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 GRSF1Q12849 480 aaKnown RBP eCLIP19.1■□□□□ 0.65
PTPRU-207ENST00000492954 ISM2Q6H9L7 571 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 ZC3H3Q8IXZ2 948 aaKnown RBP19.1■□□□□ 0.65
PTPRU-207ENST00000492954 CCDC150Q8NCX0 1101 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 PDZD8Q8NEN9 1154 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 OVCA2Q8WZ82 227 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 NT5C1AQ9BXI3 368 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 FBRSL1Q9HCM7 1045 aaKnown RBP19.1■□□□□ 0.65
PTPRU-207ENST00000492954 IL37Q9NZH6 218 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 GMIPQ9P107 970 aa19.1■□□□□ 0.65
PTPRU-207ENST00000492954 CHORDC1Q9UHD1 332 aaPredicted RBP19.1■□□□□ 0.65
PTPRU-207ENST00000492954 SCAMP3O14828 347 aaKnown RBP19.09■□□□□ 0.65
PTPRU-207ENST00000492954 SLC16A3O15427 465 aaKnown RBP19.09■□□□□ 0.65
PTPRU-207ENST00000492954 GADD45BO75293 160 aaPredicted RBP19.09■□□□□ 0.65
PTPRU-207ENST00000492954 CILPO75339 1184 aa19.09■□□□□ 0.65
PTPRU-207ENST00000492954 EGFP01133 1207 aa19.09■□□□□ 0.65
PTPRU-207ENST00000492954 GALK1P51570 392 aa19.09■□□□□ 0.65
PTPRU-207ENST00000492954 AMPD2Q01433 879 aa19.09■□□□□ 0.65
PTPRU-207ENST00000492954 DMWDQ09019 674 aa19.09■□□□□ 0.65
PTPRU-207ENST00000492954 DCAF17Q5H9S7 520 aaPredicted RBP19.09■□□□□ 0.65
PTPRU-207ENST00000492954 PKN3Q6P5Z2 889 aa19.09■□□□□ 0.65
PTPRU-207ENST00000492954 SYNPOQ8N3V7 929 aa19.09■□□□□ 0.65
PTPRU-207ENST00000492954 FBXL13Q8NEE6 735 aa19.09■□□□□ 0.65
PTPRU-207ENST00000492954 WHAMMQ8TF30 809 aa19.09■□□□□ 0.65
PTPRU-207ENST00000492954 CSNK1G1Q9HCP0 422 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms