RNA–Protein interactions for RNA: ENST00000491870.1

DEFB109F-201, Transcript of defensin beta 109F (pseudogene), humanhuman

BASIC

Gene DEFB109F, Length 277 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB109F-201ENST00000491870 GAP43P17677 238 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 CHRNB2P17787 502 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 KCNA3P22001 575 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 PRDX5P30044 214 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 NTF4P34130 210 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 RFC4P35249 363 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 CD96P40200 585 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 CDK7P50613 346 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 CACNA2D1P54289 1103 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 ID3Q02535 119 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 KRT17Q04695 432 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 PTPN11Q06124 597 aaPredicted RBP4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 SLC34A1Q06495 639 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 CALCOCO2Q13137 446 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 SPARCL1Q14515 664 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 ZRSR2Q15696 482 aaKnown RBP4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 EPC2Q52LR7 807 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 CAVIN4Q5BKX8 364 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 ACSBG2Q5FVE4 666 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 HERC4Q5GLZ8 1057 aaPredicted RBP4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 SLC10A5Q5PT55 438 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 RNF220Q5VTB9 566 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 SNX30Q5VWJ9 437 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 SPTY2D1Q68D10 685 aaPredicted RBP4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 AADACL2Q6P093 401 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 GJB7Q6PEY0 223 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 RNF207Q6ZRF8 634 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 NLRP9Q7RTR0 991 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 ANKS1BQ7Z6G8 1248 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 LCA5Q86VQ0 697 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 VSIG1Q86XK7 387 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 PALB2Q86YC2 1186 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 C12orf56Q8IXR9 622 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 KBTBD2Q8IY47 623 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 RPUSD2Q8IZ73 545 aaKnown RBP4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 ANKRD35Q8N283 1001 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 ZNF276Q8N554 614 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 ETNPPLQ8TBG4 499 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 SH3RF3Q8TEJ3 882 aaPredicted RBP4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 GRK7Q8WTQ7 553 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 ISL2Q96A47 359 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 SKA1Q96BD8 255 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 PPP1R14BQ96C90 147 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 FGD4Q96M96 766 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 ASB16Q96NS5 453 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 OLFM3Q96PB7 478 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 LRRC37BQ96QE4 947 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 FIZ1Q96SL8 496 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 IWS1Q96ST2 819 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 AGPAT1Q99943 283 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 REEP2Q9BRK0 252 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 DHRS4Q9BTZ2 278 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 TRAIPQ9BWF2 469 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 STRA6Q9BX79 667 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 CADM1Q9BY67 442 aaKnown RBP4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 DCLK3Q9C098 648 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 INTS2Q9H0H0 1204 aaKnown RBP4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 GLT8D2Q9H1C3 349 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 VCX3BQ9H321 246 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 KANSL2Q9H9L4 492 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 VCX3AQ9NNX9 186 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 ARHGEF4Q9NR80 690 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 KRT82Q9NSB4 513 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 MCM9Q9NXL9 1143 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 NKIRAS1Q9NYS0 192 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 TAS2R14Q9NYV8 317 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 TMOD4Q9NZQ9 345 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 LARSQ9P2J5 1176 aaKnown RBP4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 UVRAGQ9P2Y5 699 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 APEX2Q9UBZ4 518 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 DDX25Q9UHL0 483 aaKnown RBP4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 GGT7Q9UJ14 662 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 DNAJC12Q9UKB3 198 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 GTF3C4Q9UKN8 822 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 PHTF1Q9UMS5 762 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 MINPP1Q9UNW1 487 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 NAALADL1Q9UQQ1 740 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 COMMD3-BMI1R4GMX3 469 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 SIP14410 1827 aa4.93□□□□□ -1.62
DEFB109F-201ENST00000491870 NPHP3-ACAD11A0A0J9YXS1 232 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 F5H6K3 240 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 CREB3O43889 395 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 CCDC22O60826 627 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 PPP1R11O60927 126 aaPredicted RBP4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 LRRN2O75325 713 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 ENTPD5O75356 428 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 KRT36O76013 467 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 TGDSO95455 350 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 PRNPP04156 253 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 CYP1A1P04798 512 aaPredicted RBP4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 ATP5BP06576 529 aaKnown RBP4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 PYGLP06737 847 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 LYNP07948 512 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 PDHA1P08559 390 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 DHRS4L1P0CG22 281 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 ZNF865P0CJ78 1059 aaPredicted RBP4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 FGFR1P11362 822 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 TNFAIP3P21580 790 aa4.92□□□□□ -1.62
DEFB109F-201ENST00000491870 COMTP21964 271 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms