RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 ODF2Q5BJF6 829 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 FKBP15Q5T1M5 1219 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 FAM111BQ6SJ93 734 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 CCDC149Q6ZUS6 474 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 ITPRIPQ8IWB1 547 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 PDCL2Q8N4E4 241 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 TRIML1Q8N9V2 468 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 FBXO18Q8NFZ0 1043 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 ARHGAP45Q92619 1136 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 KAT5Q92993 513 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 ATP2A3Q93084 1043 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 RAB24Q969Q5 203 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 NT5C1BQ96P26 610 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 ASB2Q96Q27 587 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 RBM15Q96T37 977 aaKnown RBP eCLIP5.21□□□□□ -1.58
RTN4-215ENST00000491592 SDF4Q9BRK5 362 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 SENP6Q9GZR1 1112 aaPredicted RBP5.21□□□□□ -1.58
RTN4-215ENST00000491592 LDAHQ9H6V9 325 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 MANSC1Q9H8J5 431 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 PIH1D1Q9NWS0 290 aaKnown RBP5.21□□□□□ -1.58
RTN4-215ENST00000491592 UTP6Q9NYH9 597 aaKnown RBP5.21□□□□□ -1.58
RTN4-215ENST00000491592 PLA2G3Q9NZ20 509 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 PCSK1NQ9UHG2 260 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 SLC13A4Q9UKG4 626 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 CNOT11Q9UKZ1 510 aaKnown RBP5.21□□□□□ -1.58
RTN4-215ENST00000491592 GPR34Q9UPC5 381 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 CFAP20Q9Y6A4 193 aaKnown RBP5.21□□□□□ -1.58
RTN4-215ENST00000491592 CLTCL1P53675 1640 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 TRPM2O94759 1503 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 PTPRTO14522 1441 aa5.21□□□□□ -1.58
RTN4-215ENST00000491592 MYOM2P54296 1465 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 ERVK-7P63135 1459 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 ZNF518AQ6AHZ1 1483 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 KIF24Q5T7B8 1368 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 PATE3B3GLJ2 98 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 P4HA2O15460 535 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 SGTAO43765 313 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 TBCAO75347 108 aaKnown RBP5.2□□□□□ -1.58
RTN4-215ENST00000491592 GPR32O75388 356 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 DNTTP04053 509 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 ITGB3P05106 788 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 POU2F2P09086 479 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 PARP1P09874 1014 aaKnown RBP5.2□□□□□ -1.58
RTN4-215ENST00000491592 KRT13P13646 458 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 P4HA1P13674 534 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 XBP1P17861 261 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 PTPN7P35236 360 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 NPTX2P47972 431 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 MCM2P49736 904 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 FLT3LGP49771 235 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 FXR1P51114 621 aaKnown RBP eCLIP5.2□□□□□ -1.58
RTN4-215ENST00000491592 EVCP57679 992 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 CDC42EP1Q00587 391 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 LRRC74AQ0VAA2 488 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 MRPL49Q13405 166 aaKnown RBP5.2□□□□□ -1.58
RTN4-215ENST00000491592 TAF7Q15545 349 aaPredicted RBP5.2□□□□□ -1.58
RTN4-215ENST00000491592 GPATCH4Q5T3I0 446 aaKnown RBP5.2□□□□□ -1.58
RTN4-215ENST00000491592 CAVIN1Q6NZI2 390 aaKnown RBP5.2□□□□□ -1.58
RTN4-215ENST00000491592 CNSTQ6PJW8 725 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 RFX8Q6ZV50 586 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 USP45Q70EL2 814 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 ZNF572Q7Z3I7 529 aaPredicted RBP5.2□□□□□ -1.58
RTN4-215ENST00000491592 POLNQ7Z5Q5 900 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 NLRP14Q86W24 1093 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 CARNMT1Q8N4J0 409 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 OR2C3Q8N628 320 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 CCHCR1Q8TD31 782 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 ADAMTS18Q8TE60 1221 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 SSH3Q8TE77 659 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 ZNF512Q96ME7 567 aaPredicted RBP5.2□□□□□ -1.58
RTN4-215ENST00000491592 MOGAT1Q96PD6 335 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 TAAR9Q96RI9 348 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 TBCBQ99426 244 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 KATNAL1Q9BW62 490 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 VPS33BQ9H267 617 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 EPC1Q9H2F5 836 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 UBN1Q9NPG3 1134 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 TDP1Q9NUW8 608 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 HOXC10Q9NYD6 342 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 DKK3Q9UBP4 350 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.2□□□□□ -1.58
RTN4-215ENST00000491592 AJAP1Q9UKB5 411 aaPredicted RBP5.2□□□□□ -1.58
RTN4-215ENST00000491592 NOS1P29475 1434 aa5.2□□□□□ -1.58
RTN4-215ENST00000491592 H7C0S8 307 aa5.19□□□□□ -1.58
RTN4-215ENST00000491592 EIF3FO00303 357 aaPredicted RBP5.19□□□□□ -1.58
RTN4-215ENST00000491592 AP1G1O43747 822 aa5.19□□□□□ -1.58
RTN4-215ENST00000491592 DHRS4L1P0CG22 281 aa5.19□□□□□ -1.58
RTN4-215ENST00000491592 THEGLP0DJG4 465 aa5.19□□□□□ -1.58
RTN4-215ENST00000491592 EEF2P13639 858 aaKnown RBP5.19□□□□□ -1.58
RTN4-215ENST00000491592 AKR1B1P15121 316 aa5.19□□□□□ -1.58
RTN4-215ENST00000491592 PDCP20941 246 aa5.19□□□□□ -1.58
RTN4-215ENST00000491592 FPR1P21462 350 aa5.19□□□□□ -1.58
RTN4-215ENST00000491592 PCSK1P29120 753 aa5.19□□□□□ -1.58
RTN4-215ENST00000491592 PPM1AP35813 382 aa5.19□□□□□ -1.58
RTN4-215ENST00000491592 TNNT3P45378 269 aaPredicted RBP5.19□□□□□ -1.58
RTN4-215ENST00000491592 FOXL1Q12952 345 aa5.19□□□□□ -1.58
RTN4-215ENST00000491592 TARDBPQ13148 414 aaKnown RBP eCLIP5.19□□□□□ -1.58
RTN4-215ENST00000491592 SP140Q13342 867 aa5.19□□□□□ -1.58
RTN4-215ENST00000491592 ZNF267Q14586 743 aaPredicted RBP5.19□□□□□ -1.58
RTN4-215ENST00000491592 SYCP1Q15431 976 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms