RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 SLC10A6Q3KNW5 377 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 SH3PXD2AQ5TCZ1 1133 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 E4F1Q66K89 784 aaPredicted RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 LMBRD2Q68DH5 695 aaPredicted RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 CWF19L1Q69YN2 538 aaKnown RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 KRT39Q6A163 491 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 MRPL14Q6P1L8 145 aaKnown RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 TRIM65Q6PJ69 517 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 WDR59Q6PJI9 974 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 ANKS3Q6ZW76 656 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 SV2AQ7L0J3 742 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 RRAGAQ7L523 313 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 USP37Q86T82 979 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 SLC7A14Q8TBB6 771 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 GPR152Q8TDT2 470 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 ZDHHC1Q8WTX9 485 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 SEMA4DQ92854 862 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 NXPE3Q969Y0 559 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 SNX27Q96L92 541 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 FNBP1Q96RU3 617 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 NAA15Q9BXJ9 866 aaKnown RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 NLRC4Q9NPP4 1024 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 SLC38A7Q9NVC3 462 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 HCFC1R1Q9NWW0 138 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 DNMT3BQ9UBC3 853 aaKnown RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 MTRRQ9UBK8 725 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 WNT16Q9UBV4 365 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 FBXL5Q9UKA1 691 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 AJAP1Q9UKB5 411 aaPredicted RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 CA14Q9ULX7 337 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 COQ4Q9Y3A0 265 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 BACE2Q9Y5Z0 518 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 FHOD1Q9Y613 1164 aa8.08□□□□□ -1.12
CLDN1-202ENST00000490800 DNMT3AQ9Y6K1 912 aaPredicted RBP8.08□□□□□ -1.12
CLDN1-202ENST00000490800 PIEZO1Q92508 2521 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 ANK1P16157 1881 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 PLXNA3P51805 1871 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 LRRC53A6NM62 1247 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 ANHXE9PGG2 379 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 ARHGAP6O43182 974 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 NRDCO43847 1150 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 TBC1D4O60343 1298 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 XYLBO75191 536 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 LRRN2O75325 713 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 CXCL8P10145 99 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 SRFP11831 508 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 RPL9P32969 192 aaKnown RBP8.07□□□□□ -1.12
CLDN1-202ENST00000490800 PLA2G4AP47712 749 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 ARPP19P56211 112 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 GPC5P78333 572 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 POU5F1Q01860 360 aaKnown RBP8.07□□□□□ -1.12
CLDN1-202ENST00000490800 CETN1Q12798 172 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 HTR4Q13639 388 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 SURF1Q15526 300 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 KYAT1Q16773 422 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 ZACNQ401N2 412 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 TDRD10Q5VZ19 366 aaKnown RBP8.07□□□□□ -1.12
CLDN1-202ENST00000490800 IQCEQ6IPM2 695 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 GJB7Q6PEY0 223 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 PARM1Q6UWI2 310 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 RAD9BQ6WBX8 426 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 CACNA2D4Q7Z3S7 1137 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 TMTC1Q8IUR5 882 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 WDR49Q8IV35 697 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 TMEM130Q8N3G9 435 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 C17orf53Q8N3J3 647 aaPredicted RBP8.07□□□□□ -1.12
CLDN1-202ENST00000490800 ZNF397Q8NF99 534 aaPredicted RBP8.07□□□□□ -1.12
CLDN1-202ENST00000490800 OR5B17Q8NGF7 314 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 ZNF461Q8TAF7 563 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 ITFG1Q8TB96 612 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 TAS1R2Q8TE23 839 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 RHBDD1Q8TEB9 315 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 FGF13Q92913 245 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 FGF14Q92915 247 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 COL26A1Q96A83 441 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 RPF1Q9H9Y2 349 aaKnown RBP8.07□□□□□ -1.12
CLDN1-202ENST00000490800 CNTN3Q9P232 1028 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 CDH7Q9ULB5 785 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 NUB1Q9Y5A7 615 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 ZFP37Q9Y6Q3 630 aaPredicted RBP8.07□□□□□ -1.12
CLDN1-202ENST00000490800 NUMBLQ9Y6R0 609 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 USP34Q70CQ2 3546 aa8.07□□□□□ -1.12
CLDN1-202ENST00000490800 C2orf16Q68DN1 1984 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 DMDP11532 3685 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 WDR27A2RRH5 827 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 LACTBL1A8MY62 500 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 SYN3O14994 580 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 ABLIM3O94929 683 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 IL18RAPO95256 599 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 SEC24AO95486 1093 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 VNN1O95497 513 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 AVPP01185 164 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 HLA-DRAP01903 254 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 PTPN2P17706 415 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 TNNI1P19237 187 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 MSNP26038 577 aaKnown RBP8.06□□□□□ -1.12
CLDN1-202ENST00000490800 HOXA9P31269 272 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 ELF1P32519 619 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 GPC1P35052 558 aa8.06□□□□□ -1.12
CLDN1-202ENST00000490800 RNF144AP50876 292 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms