RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 MTF2Q9Y483 593 aaPredicted RBP9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 KRT19P08727 400 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 PDGFRBP09619 1106 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 PRKCQQ04759 706 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 CCINQ13939 588 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 EML3Q32P44 896 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 TMEM31Q5JXX7 168 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 USP37Q86T82 979 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 PJA1Q8NG27 643 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 SCAMP5Q8TAC9 235 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 ING5Q8WYH8 240 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 LMLNQ96KR4 655 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 KLF16Q9BXK1 252 aaPredicted RBP9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 ABI2Q9NYB9 513 aaPredicted RBP9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 FBXO10Q9UK96 956 aa9.75□□□□□ -0.85
SUPT20H-220ENST00000490716 F8VP50 259 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 TULP2O00295 520 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 PBX1P40424 430 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 SLC5A3P53794 718 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 RPL10AP62906 217 aaKnown RBP9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 APBA1Q02410 837 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 ASTLQ6HA08 431 aaPredicted RBP9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 PDZD4Q76G19 769 aaPredicted RBP9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 ACOT1Q86TX2 421 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 FBXL6Q8N531 539 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 TTC39CQ8N584 583 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 GIPC2Q8TF65 315 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 CNOT6LQ96LI5 555 aaKnown RBP9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 TTYH3Q9C0H2 523 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 NMUR1Q9HB89 426 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 BIN1O00499 593 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 CFHP08603 1231 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 VIPR2P41587 438 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 CYP4F8P98187 520 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 TCP11X2Q5H9J9 407 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 BEND5Q7L4P6 421 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 ARID3BQ8IVW6 561 aaPredicted RBP9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 ANKRD52Q8NB46 1076 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 SLC2A14Q8TDB8 520 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 CCDC47Q96A33 483 aaKnown RBP9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 MSANTD3Q96H12 275 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 KXD1Q9BQD3 176 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 PCDHGC3Q9UN70 934 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 PCDH15Q96QU1 1955 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 GPD2P43304 727 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 ALDH1A3P47895 512 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 TNNC1P63316 161 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 GAS6Q14393 721 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 NUP93Q8N1F7 819 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 NT5C1AQ9BXI3 368 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 NUP62CLQ9H1M0 184 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 PLCB1Q9NQ66 1216 aa9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 SAMSN1Q9NSI8 373 aaKnown RBP9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 MRPS23Q9Y3D9 190 aaKnown RBP9.74□□□□□ -0.85
SUPT20H-220ENST00000490716 HEPACAM2A8MVW5 462 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 LILRB5O75023 590 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 AFPP02771 609 aaKnown RBP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 GABRR2P28476 465 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 FAM71AQ8IYT1 594 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 NOC3LQ8WTT2 800 aaKnown RBP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 INTS2Q9H0H0 1204 aaKnown RBP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 KIF9Q9HAQ2 790 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 UXTQ9UBK9 157 aaPredicted RBP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 A8MXQ7 604 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 CHRNB1P11230 501 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 PSMC3P17980 439 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 CLCN1P35523 988 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 ARID5BQ14865 1188 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 KIAA0907Q7Z7F0 614 aaPredicted RBP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 SPATA2LQ8IUW3 424 aaPredicted RBP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 ETFBKMTQ8IXQ9 262 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 MCRS1Q96EZ8 462 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 TNIP3Q96KP6 325 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 TSG101Q99816 390 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 DMAP1Q9NPF5 467 aaPredicted RBP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 TCRBV5S1A1TA0A578 114 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 XPO1O14980 1071 aaKnown RBP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 TBXAS1P24557 533 aaPredicted RBP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 AVPR2P30518 371 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 GSCP56915 257 aaPredicted RBP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 ORC1Q13415 861 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 OTUD1Q5VV17 481 aaPredicted RBP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 TXNDC8Q6A555 127 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 DENND5BQ6ZUT9 1274 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 SLC4A5Q9BY07 1137 aa9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.73□□□□□ -0.85
SUPT20H-220ENST00000490716 TRDMT1O14717 391 aaKnown RBP9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 EPHB6O15197 1021 aa9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 COCHO43405 550 aa9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 GALR2O43603 387 aaPredicted RBP9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 SLC9A1P19634 815 aa9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 GABRB2P47870 512 aa9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 ARPP19P56211 112 aa9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 TRPC3Q13507 836 aa9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 CNGA2Q16280 664 aa9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 KLHL40Q2TBA0 621 aa9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 MGAT5BQ3V5L5 792 aa9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 TMEM196Q5HYL7 178 aa9.72□□□□□ -0.85
SUPT20H-220ENST00000490716 CELF5Q8N6W0 485 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms