RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	ACP6	Q9NPH0	428 aa		19.65	■□□□□ 0.74
C4A-256	ENST00000490663	GMIP	Q9P107	970 aa		19.65	■□□□□ 0.74
C4A-256	ENST00000490663	TSPAN16	Q9UKR8	245 aa		19.65	■□□□□ 0.74
C4A-256	ENST00000490663	ECI2	O75521	394 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	SRF	P11831	508 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	ATP1A3	P13637	1013 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	NPR3	P17342	541 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	YWHAQ	P27348	245 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	GCNT1	Q02742	428 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	SGO2	Q562F6	1265 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	DHX40	Q8IX18	779 aa	Known RBP	19.64	■□□□□ 0.73
C4A-256	ENST00000490663	UBALD2	Q8IYN6	164 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	CMTM8	Q8IZV2	173 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	UBA3	Q8TBC4	463 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	ZFYVE19	Q96K21	471 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	LSM14B	Q9BX40	385 aa	Known RBP	19.64	■□□□□ 0.73
C4A-256	ENST00000490663	DUSP16	Q9BY84	665 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	APEX2	Q9UBZ4	518 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	CHORDC1	Q9UHD1	332 aa	Predicted RBP	19.64	■□□□□ 0.73
C4A-256	ENST00000490663	FBXL21	Q9UKT6	434 aa		19.64	■□□□□ 0.73
C4A-256	ENST00000490663	F5	P12259	2224 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	CYP26A1	O43174	497 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	GDI1	P31150	447 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	USP8	P40818	1118 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	COPB1	P53618	953 aa	Known RBP	19.63	■□□□□ 0.73
C4A-256	ENST00000490663	TMEM31	Q5JXX7	168 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	ARHGAP17	Q68EM7	881 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	DPY19L2P1	Q6NXN4	242 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	HFE2	Q6ZVN8	426 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	USP13	Q92995	863 aa	Predicted RBP	19.63	■□□□□ 0.73
C4A-256	ENST00000490663	NXPE3	Q969Y0	559 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	LRFN3	Q9BTN0	628 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	GPR88	Q9GZN0	384 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	TRPM5	Q9NZQ8	1165 aa		19.63	■□□□□ 0.73
C4A-256	ENST00000490663	GTPBP10	A4D1E9	387 aa	Known RBP	19.62	■□□□□ 0.73
C4A-256	ENST00000490663	KRBA1	A5PL33	1030 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	BECN2	A8MW95	431 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663		O00370	1275 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	SCAMP3	O14828	347 aa	Known RBP	19.62	■□□□□ 0.73
C4A-256	ENST00000490663	RTN3	O95197	1032 aa	Predicted RBP	19.62	■□□□□ 0.73
C4A-256	ENST00000490663	CKM	P06732	381 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	VDR	P11473	427 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	PTMS	P20962	102 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	ZNF132	P52740	706 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	PDE4C	Q08493	712 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	ZSCAN23	Q3MJ62	389 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	MON1A	Q86VX9	555 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	SIX5	Q8N196	739 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	TTC8	Q8TAM2	541 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	SLITRK1	Q96PX8	696 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	DNAI2	Q9GZS0	605 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	TRPV4	Q9HBA0	871 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	DNAJC12	Q9UKB3	198 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	FHOD1	Q9Y613	1164 aa		19.62	■□□□□ 0.73
C4A-256	ENST00000490663	TRAV19	A0A0A6YYK7	116 aa		19.61	■□□□□ 0.73
C4A-256	ENST00000490663	ZNF840P	A6NDX5	716 aa		19.61	■□□□□ 0.73
C4A-256	ENST00000490663	PIK3R2	O00459	728 aa		19.61	■□□□□ 0.73
C4A-256	ENST00000490663	DPYSL4	O14531	572 aa		19.61	■□□□□ 0.73
C4A-256	ENST00000490663	ZNF18	P17022	549 aa		19.61	■□□□□ 0.73
C4A-256	ENST00000490663	AVPR1A	P37288	418 aa		19.61	■□□□□ 0.73
C4A-256	ENST00000490663	NFKBIB	Q15653	356 aa		19.61	■□□□□ 0.73
C4A-256	ENST00000490663	NDRG1	Q92597	394 aa	Known RBP	19.61	■□□□□ 0.73
C4A-256	ENST00000490663	C1QTNF1	Q9BXJ1	281 aa		19.61	■□□□□ 0.73
C4A-256	ENST00000490663	CCSER2	Q9H7U1	834 aa		19.61	■□□□□ 0.73
C4A-256	ENST00000490663	BRD9	Q9H8M2	597 aa		19.61	■□□□□ 0.73
C4A-256	ENST00000490663	FAM170A	A1A519	330 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663		M0QYV0	167 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	GPR37L1	O60883	481 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	PAEP	P09466	180 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	PSMC3	P17980	439 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	CDK11B	P21127	795 aa	Known RBP	19.6	■□□□□ 0.73
C4A-256	ENST00000490663	DDX6	P26196	483 aa	Known RBP eCLIP	19.6	■□□□□ 0.73
C4A-256	ENST00000490663	RGS7	P49802	495 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	ZNF165	P49910	485 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	MFAP3	P55082	362 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	RAPGEF1	Q13905	1077 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	PIGZ	Q86VD9	579 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	MFSD6L	Q8IWD5	586 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	ANKRD52	Q8NB46	1076 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	PBXIP1	Q96AQ6	731 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	CEP295NL	Q96MC4	621 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	TRMT61B	Q9BVS5	477 aa	Known RBP	19.6	■□□□□ 0.73
C4A-256	ENST00000490663	NAT10	Q9H0A0	1025 aa	Known RBP	19.6	■□□□□ 0.73
C4A-256	ENST00000490663	RNF38	Q9H0F5	515 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	FAM124B	Q9H5Z6	455 aa	Predicted RBP	19.6	■□□□□ 0.73
C4A-256	ENST00000490663	NMUR1	Q9HB89	426 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	SMPD4	Q9NXE4	827 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	IL37	Q9NZH6	218 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	LIMA1	Q9UHB6	759 aa	Known RBP	19.6	■□□□□ 0.73
C4A-256	ENST00000490663	RAPGEFL1	Q9UHV5	662 aa		19.6	■□□□□ 0.73
C4A-256	ENST00000490663	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	19.6	■□□□□ 0.73
C4A-256	ENST00000490663	MYO18A	Q92614	2054 aa	Known RBP	19.6	■□□□□ 0.73
C4A-256	ENST00000490663	LETM1	O95202	739 aa	Predicted RBP	19.59	■□□□□ 0.73
C4A-256	ENST00000490663	HDC	P19113	662 aa		19.59	■□□□□ 0.73
C4A-256	ENST00000490663	BCAT1	P54687	386 aa		19.59	■□□□□ 0.73
C4A-256	ENST00000490663	ZXDB	P98169	803 aa		19.59	■□□□□ 0.73
C4A-256	ENST00000490663	BST2	Q10589	180 aa	Known RBP	19.59	■□□□□ 0.73
C4A-256	ENST00000490663	APTX	Q7Z2E3	356 aa	Known RBP	19.59	■□□□□ 0.73
C4A-256	ENST00000490663	YAF2	Q8IY57	180 aa		19.59	■□□□□ 0.73
C4A-256	ENST00000490663	FLCN	Q8NFG4	579 aa		19.59	■□□□□ 0.73

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms