RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 TNFRSF10BO14763 440 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 PHACTR2O75167 634 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 NR3C1P04150 777 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 RPN1P04843 607 aaKnown RBP20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 PPP3CCP48454 512 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 IFNAR2P48551 515 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 AMPD2Q01433 879 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 BIRC3Q13489 604 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 ZNF699Q32M78 642 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 ZACNQ401N2 412 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 SPATA32Q96LK8 384 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 IL37Q9NZH6 218 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 RAB23Q9ULC3 237 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 NCOR2Q9Y618 2525 aa20.65■□□□□ 0.9
TNFRSF1B-202ENST00000489921 MYL1P05976 194 aa20.64■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ZNF667Q5HYK9 610 aa20.64■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ADGRG2Q8IZP9 1017 aa20.64■□□□□ 0.89
TNFRSF1B-202ENST00000489921 FAM160A2Q8N612 972 aaPredicted RBP20.64■□□□□ 0.89
TNFRSF1B-202ENST00000489921 TMC2Q8TDI7 906 aa20.64■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CD101Q93033 1021 aa20.64■□□□□ 0.89
TNFRSF1B-202ENST00000489921 EHD2Q9NZN4 543 aa20.64■□□□□ 0.89
TNFRSF1B-202ENST00000489921 USP18Q9UMW8 372 aa20.64■□□□□ 0.89
TNFRSF1B-202ENST00000489921 TRAF3IP3Q9Y228 551 aa20.64■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CCDC163A0A0D9SF12 145 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 LRP3O75074 770 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ATG13O75143 517 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 RHOBTB3O94955 611 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 OPRD1P41143 372 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 PDE6CP51160 858 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ATXN1P54253 815 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 KRT85P78386 507 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 DPYDQ12882 1025 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SCARA5Q6ZMJ2 495 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SV2AQ7L0J3 742 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 FAM35AQ86V20 835 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 FUKQ8N0W3 1084 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 NUP93Q8N1F7 819 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ZMIZ2Q8NF64 920 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SCAMP5Q8TAC9 235 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 GOLPH3LQ9H4A5 285 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 HMGXB4Q9UGU5 601 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CPQQ9Y646 472 aa20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SDK1Q7Z5N4 2213 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 PRR5-ARHGAP8B1AHC4 643 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 K7EQS6 105 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 IKBKBO14920 756 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 BEST1O76090 585 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 YWHAQP27348 245 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SYKP43405 635 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ARHGAP8P85298 464 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 LMNB2Q03252 620 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SGSM1Q2NKQ1 1148 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 FBXO43Q4G163 708 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SNX30Q5VWJ9 437 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SPOPLQ6IQ16 392 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 FILIP1Q7Z7B0 1213 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ACOT1Q86TX2 421 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 KIAA1958Q8N8K9 716 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 RPLP0P6Q8NHW5 317 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 GAB3Q8WWW8 586 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ZFRQ96KR1 1074 aaKnown RBP20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SEMA4GQ9NTN9 838 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CHORDC1Q9UHD1 332 aaPredicted RBP20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 MYH10P35580 1976 aa20.62■□□□□ 0.89
TNFRSF1B-202ENST00000489921 FAM92AA1XBS5 289 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ASS1P00966 412 aaKnown RBP20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CYP17A1P05093 508 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CHRM1P11229 460 aaPredicted RBP20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ASPAP45381 313 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 PGFP49763 221 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 MCCD1P59942 119 aaPredicted RBP20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 MESP2Q0VG99 397 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 IFRD2Q12894 506 aaPredicted RBP20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ORC1Q13415 861 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 NFIL3Q16649 462 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SYT13Q7L8C5 426 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CRYBG2Q8N1P7 616 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CAMKK1Q8N5S9 505 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SLITRK1Q96PX8 696 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SMOQ99835 787 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SMPD4Q9NXE4 827 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SLC8A2Q9UPR5 921 aa20.61■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SCAMP3O14828 347 aaKnown RBP20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 MAPK13O15264 365 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 AKAP3O75969 853 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 RTN3O95197 1032 aaPredicted RBP20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 NFATC1O95644 943 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ABL1P00519 1130 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ZDHHC11BP0C7U3 371 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 NDST1P52848 882 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SLC5A3P53794 718 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 NR1H3Q13133 447 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CSRP2Q16527 193 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CEP135Q66GS9 1140 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 RHBDF2Q6PJF5 856 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 KRBA2Q6ZNG9 492 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SFTPA1Q8IWL2 248 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 OVCA2Q8WZ82 227 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms