RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 WNT6Q9Y6F9 365 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 ABCA7Q8IZY2 2146 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 AKAP13Q12802 2813 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 ZZEF1O43149 2961 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 EGFP01133 1207 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 CCDC130P13994 396 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 NR2F2P24468 414 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 GNL1P36915 607 aaPredicted RBP12.58□□□□□ -0.4
SRSF4-204ENST00000489898 CYP27A1Q02318 531 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 SRSF5Q13243 272 aaKnown RBP12.58□□□□□ -0.4
SRSF4-204ENST00000489898 SNX30Q5VWJ9 437 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 C12orf40Q86WS4 652 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 SPEM1Q8N4L4 309 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 UBR7Q8N806 425 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 OR6B3Q8NGW1 331 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 SCAMP5Q8TAC9 235 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 MRPS31Q92665 395 aaKnown RBP12.58□□□□□ -0.4
SRSF4-204ENST00000489898 GCNAQ96QF7 691 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 MMS19Q96T76 1030 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 ARID3AQ99856 593 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 SCAND2PQ9GZW5 306 aaPredicted RBP12.58□□□□□ -0.4
SRSF4-204ENST00000489898 OSER1Q9NX31 292 aa12.58□□□□□ -0.4
SRSF4-204ENST00000489898 MAGEC2Q9UBF1 373 aaPredicted RBP12.58□□□□□ -0.4
SRSF4-204ENST00000489898 UXTQ9UBK9 157 aaPredicted RBP12.58□□□□□ -0.4
SRSF4-204ENST00000489898 MRPS17Q9Y2R5 130 aaKnown RBP12.58□□□□□ -0.4
SRSF4-204ENST00000489898 CHD8Q9HCK8 2581 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 ADAMTS9Q9P2N4 1935 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 IKBKBO14920 756 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 TRIM66O15016 1216 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 CYP17A1P05093 508 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
SRSF4-204ENST00000489898 HOXA6P31267 233 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 AVPR1AP37288 418 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 NDST1P52848 882 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 SLC5A3P53794 718 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 TNNC1P63316 161 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 TAF10Q12962 218 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 MAPRE1Q15691 268 aaKnown RBP12.57□□□□□ -0.4
SRSF4-204ENST00000489898 ZNF667Q5HYK9 610 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 CLEC20AQ6ZU45 233 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 CRYBG2Q8N1P7 616 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 C12orf29Q8N999 325 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 CSGALNACT1Q8TDX6 532 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 SH3RF2Q8TEC5 729 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 RMDN1Q96DB5 314 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 EEF2KMTQ96G04 330 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 LINC00597Q9H2U6 94 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 ECT2Q9H8V3 914 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 TRPC7Q9HCX4 862 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 HCN2Q9UL51 889 aa12.57□□□□□ -0.4
SRSF4-204ENST00000489898 SDK1Q7Z5N4 2213 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 USP24Q9UPU5 2620 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 TRAV19A0A0A6YYK7 116 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 TRIM49BA6NDI0 452 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 A8MXQ7 604 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 CHURC1-FNTBB4DL54 471 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 LEFTY2O00292 366 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 SCAMP3O14828 347 aaKnown RBP12.56□□□□□ -0.4
SRSF4-204ENST00000489898 HRO43593 1189 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 CILPO75339 1184 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 CKMP06732 381 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 USP17L7P0C7H9 530 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 HNRNPLP14866 589 aaKnown RBP eCLIP12.56□□□□□ -0.4
SRSF4-204ENST00000489898 PRCPP42785 496 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 GCLMP48507 274 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 CCR3P51677 355 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 VAMP7P51809 220 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 AP3M2P53677 418 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 BIRC3Q13489 604 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 EDRF1Q3B7T1 1238 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 CBWD6Q4V339 395 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 CBWD3Q5JTY5 395 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 CBWD5Q5RIA9 395 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 C1orf228Q6PIY5 440 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 ZC3H14Q6PJT7 736 aaKnown RBP12.56□□□□□ -0.4
SRSF4-204ENST00000489898 BHLHA9Q7RTU4 235 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 ACOT1Q86TX2 421 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 YAF2Q8IY57 180 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 DUSP9Q99956 384 aaKnown RBP12.56□□□□□ -0.4
SRSF4-204ENST00000489898 FAM126AQ9BYI3 521 aaPredicted RBP12.56□□□□□ -0.4
SRSF4-204ENST00000489898 KRT82Q9NSB4 513 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 CEP295Q9C0D2 2601 aa12.56□□□□□ -0.4
SRSF4-204ENST00000489898 NCAM2O15394 837 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 COCHO43405 550 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 KINO60870 393 aaKnown RBP12.55□□□□□ -0.4
SRSF4-204ENST00000489898 PFKLP17858 780 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 GRIK1P39086 918 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 FNTBP49356 437 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 KPNA1P52294 538 aaPredicted RBP12.55□□□□□ -0.4
SRSF4-204ENST00000489898 LRRC32Q14392 662 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 PDGFRLQ15198 375 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 DGKKQ5KSL6 1271 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 CEP135Q66GS9 1140 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 FAM186BQ8IYM0 893 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 KIAA1958Q8N8K9 716 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 SLC2A14Q8TDB8 520 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 RUBCNQ92622 972 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 NIF3L1Q9GZT8 377 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 SNX25Q9H3E2 840 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 CCSER2Q9H7U1 834 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms