RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 DAG1Q14118 895 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 SLC29A2Q14542 456 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 KCNAB1Q14722 419 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 INSCQ1MX18 579 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 HSP90AB2PQ58FF8 381 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 KSR2Q6VAB6 950 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 Q6ZWC4 215 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 SPARTQ8N0X7 666 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 LRRC71Q8N4P6 559 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 RNF152Q8N8N0 203 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 REPS1Q96D71 796 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 TBCBQ99426 244 aa6.32□□□□□ -1.4
CCDC39-206ENST00000489868 DHX36Q9H2U1 1008 aaKnown RBP6.32□□□□□ -1.4
CCDC39-206ENST00000489868 POM121BA6NF01 834 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 CD3EAPO15446 510 aaKnown RBP6.31□□□□□ -1.4
CCDC39-206ENST00000489868 IL18RAPO95256 599 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 A1BGP04217 495 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 HNRNPCP07910 306 aaKnown RBP eCLIP6.31□□□□□ -1.4
CCDC39-206ENST00000489868 MYL3P08590 195 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 GPD1P21695 349 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 IL1R2P27930 398 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 ELLP55199 621 aaPredicted RBP6.31□□□□□ -1.4
CCDC39-206ENST00000489868 EEFSECP57772 596 aaKnown RBP6.31□□□□□ -1.4
CCDC39-206ENST00000489868 CCNIQ14094 377 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 RRAGBQ5VZM2 374 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 PLAG1Q6DJT9 500 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 ANKRD16Q6P6B7 361 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 CCAR1Q8IX12 1150 aaKnown RBP6.31□□□□□ -1.4
CCDC39-206ENST00000489868 ZNF384Q8TF68 577 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 ZNF764Q96H86 408 aaPredicted RBP6.31□□□□□ -1.4
CCDC39-206ENST00000489868 LENG8Q96PV6 779 aaPredicted RBP6.31□□□□□ -1.4
CCDC39-206ENST00000489868 PRR25Q96S07 402 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 FSD1LQ9BXM9 530 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 GJB4Q9NTQ9 266 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 TRMT13Q9NUP7 481 aaKnown RBP6.31□□□□□ -1.4
CCDC39-206ENST00000489868 TBC1D23Q9NUY8 699 aa6.31□□□□□ -1.4
CCDC39-206ENST00000489868 GEMIN8Q9NWZ8 242 aaKnown RBP6.31□□□□□ -1.4
CCDC39-206ENST00000489868 AOX1Q06278 1338 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 PRC1O43663 620 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 PIAS2O75928 621 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 TJP3O95049 919 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 PARP1P09874 1014 aaKnown RBP6.3□□□□□ -1.4
CCDC39-206ENST00000489868 FAM163BP0C2L3 166 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 NHLRC4P0CG21 123 aaPredicted RBP6.3□□□□□ -1.4
CCDC39-206ENST00000489868 CYP4F2P78329 520 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 TIAL1Q01085 375 aaKnown RBP eCLIP6.3□□□□□ -1.4
CCDC39-206ENST00000489868 WDR53Q7Z5U6 358 aaPredicted RBP6.3□□□□□ -1.4
CCDC39-206ENST00000489868 YAF2Q8IY57 180 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 RP9Q8TA86 221 aaKnown RBP6.3□□□□□ -1.4
CCDC39-206ENST00000489868 THAP7Q9BT49 309 aaPredicted RBP6.3□□□□□ -1.4
CCDC39-206ENST00000489868 ARNT2Q9HBZ2 717 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 PNPLA8Q9NP80 782 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 ZNF212Q9UDV6 495 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 CAPN11Q9UMQ6 739 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 DRG1Q9Y295 367 aaKnown RBP6.3□□□□□ -1.4
CCDC39-206ENST00000489868 KAT6AQ92794 2004 aa6.3□□□□□ -1.4
CCDC39-206ENST00000489868 WIPF3A6NGB9 483 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 QSOX1O00391 747 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 RGS10O43665 173 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 PROP1O75360 226 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 PDE8BO95263 885 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 ANXA2P07355 339 aaKnown RBP6.29□□□□□ -1.4
CCDC39-206ENST00000489868 FPR3P25089 353 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 E2F1Q01094 437 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 NHLH1Q02575 133 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 TFF2Q03403 129 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 STK3Q13188 491 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 FAM153CQ494X1 144 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 AARS2Q5JTZ9 985 aaKnown RBP6.29□□□□□ -1.4
CCDC39-206ENST00000489868 PARS2Q7L3T8 475 aaKnown RBP6.29□□□□□ -1.4
CCDC39-206ENST00000489868 WDYHV1Q96HA8 205 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 PADI4Q9UM07 663 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 ADAMTS5Q9UNA0 930 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 WNT6Q9Y6F9 365 aa6.29□□□□□ -1.4
CCDC39-206ENST00000489868 TARM1B6A8C7 271 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 AP4M1O00189 453 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 RBMXL2O75526 392 aaKnown RBP6.28□□□□□ -1.4
CCDC39-206ENST00000489868 PHKG2P15735 406 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 TPH1P17752 444 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 NTSR1P30989 418 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 TPTEP56180 551 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 SOX10P56693 466 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 PSG6Q00889 435 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 HLTFQ14527 1009 aaKnown RBP eCLIP6.28□□□□□ -1.4
CCDC39-206ENST00000489868 PCID2Q5JVF3 399 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 MANEALQ5VSG8 457 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 NAPRTQ6XQN6 538 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 ZNF788Q6ZQV5 615 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 RNF44Q7L0R7 432 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 ATP11CQ8NB49 1132 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 PARD3BQ8TEW8 1205 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 TBC1D5Q92609 795 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 CTHRC1Q96CG8 243 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 VN1R3Q9BXE9 311 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 PTGFRNQ9P2B2 879 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 LPAR3Q9UBY5 353 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 VPS51Q9UID3 782 aa6.28□□□□□ -1.4
CCDC39-206ENST00000489868 ANO9A1A5B4 782 aa6.27□□□□□ -1.41
CCDC39-206ENST00000489868 FOXN3O00409 490 aaPredicted RBP6.27□□□□□ -1.41
CCDC39-206ENST00000489868 CAND2O75155 1236 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms