RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 GEMIN4P57678 1058 aaKnown RBP16.42■□□□□ 0.22
BRD9-208ENST00000489816 KRT81Q14533 505 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 CCDC142Q17RM4 750 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 KBTBD12Q3ZCT8 623 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 NOL9Q5SY16 702 aaKnown RBP16.42■□□□□ 0.22
BRD9-208ENST00000489816 PMF1Q6P1K2 205 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 CCDC62Q6P9F0 684 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 PRPF39Q86UA1 669 aaKnown RBP16.42■□□□□ 0.22
BRD9-208ENST00000489816 KCNV2Q8TDN2 545 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 NDRG1Q92597 394 aaKnown RBP16.42■□□□□ 0.22
BRD9-208ENST00000489816 FAF2Q96CS3 445 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 PSMC3IPQ9P2W1 217 aaPredicted RBP16.42■□□□□ 0.22
BRD9-208ENST00000489816 A0A0G2JND7 137 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 KBTBD13C9JR72 458 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 TRUB2O95900 331 aaKnown RBP16.42■□□□□ 0.22
BRD9-208ENST00000489816 HMGCRP04035 888 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 BNIP1Q12981 228 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 DPYSL3Q14195 570 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 PPP1R26Q5T8A7 1209 aaPredicted RBP16.42■□□□□ 0.22
BRD9-208ENST00000489816 BBS12Q6ZW61 710 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 NAT8LQ8N9F0 302 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 CCDC110Q8TBZ0 833 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 PTPRN2Q92932 1015 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 TTC17Q96AE7 1141 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 PDZD7Q9H5P4 517 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 UBN1Q9NPG3 1134 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 CHKBQ9Y259 395 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 FARP1Q9Y4F1 1045 aaPredicted RBP16.42■□□□□ 0.22
BRD9-208ENST00000489816 HBP1O60381 514 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 C22orf31O95567 290 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 TMEM132DQ14C87 1099 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 ARMCX2Q7L311 632 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 LRRC6Q86X45 466 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 CCHCR1Q8TD31 782 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 MRPL45Q9BRJ2 306 aaKnown RBP16.42■□□□□ 0.22
BRD9-208ENST00000489816 ERAP1Q9NZ08 941 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 KLK14Q9P0G3 267 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.42■□□□□ 0.22
BRD9-208ENST00000489816 SHOC2Q9UQ13 582 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 TNFSF13BQ9Y275 285 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 TRIP11Q15643 1979 aa16.42■□□□□ 0.22
BRD9-208ENST00000489816 PRPSAP2O60256 369 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 UGT1A9O60656 530 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 LGALS2P05162 132 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 RBL1P28749 1068 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 GBP2P32456 591 aaPredicted RBP16.41■□□□□ 0.22
BRD9-208ENST00000489816 IRX4P78413 519 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 SURF1Q15526 300 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 PPM1NQ8N819 430 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 DENND1AQ8TEH3 1009 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 C18orf25Q96B23 403 aaPredicted RBP16.41■□□□□ 0.22
BRD9-208ENST00000489816 TTC25Q96NG3 672 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 CEP41Q9BYV8 373 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 UGT1A7Q9HAW7 530 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 UGT1A10Q9HAW8 530 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 UGT1A8Q9HAW9 530 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 RXFP1Q9HBX9 757 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 DPP3Q9NY33 737 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 PRKAG3Q9UGI9 489 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 NUMBLQ9Y6R0 609 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 CDH5P33151 784 aaPredicted RBP16.41■□□□□ 0.22
BRD9-208ENST00000489816 IREB2P48200 963 aaKnown RBP16.41■□□□□ 0.22
BRD9-208ENST00000489816 TTLL4Q14679 1199 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 GOLGA7BQ2TAP0 167 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 PLEKHG4Q58EX7 1191 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 DRICH1Q6PGQ1 229 aaPredicted RBP16.41■□□□□ 0.22
BRD9-208ENST00000489816 OTOAQ7RTW8 1153 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 ATP11CQ8NB49 1132 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 ZNF75CPQ92670 426 aaPredicted RBP16.41■□□□□ 0.22
BRD9-208ENST00000489816 LRRC37BQ96QE4 947 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 RNF181Q9P0P0 153 aa16.41■□□□□ 0.22
BRD9-208ENST00000489816 MAP2K2P36507 400 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 YARSP54577 528 aaKnown RBP16.4■□□□□ 0.22
BRD9-208ENST00000489816 FAAP100Q0VG06 881 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 BMPR2Q13873 1038 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 GALNTL6Q49A17 601 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 BSPRYQ5W0U4 402 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 PLPPR4Q7Z2D5 763 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 FAM111AQ96PZ2 611 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 BCO2Q9BYV7 579 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 SLC13A1Q9BZW2 595 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 MAD1L1Q9Y6D9 718 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 NPTXRO95502 500 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 AKAP5P24588 427 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 ADORA2BP29275 332 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 RABGGTBP53611 331 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 ROR1Q01973 937 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 TAP1Q03518 808 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 AGGF1Q8N302 714 aaeCLIP16.4■□□□□ 0.22
BRD9-208ENST00000489816 NIPA2Q8N8Q9 360 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 RFWD2Q8NHY2 731 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 DPEP3Q9H4B8 488 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 SNTG2Q9NY99 539 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 IKBKGQ9Y6K9 419 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 A0A0G2JLL6 359 aaPredicted RBP16.4■□□□□ 0.22
BRD9-208ENST00000489816 TCRBV9S1A1TA0A576 114 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 TOP3BO95985 862 aaKnown RBP16.4■□□□□ 0.22
BRD9-208ENST00000489816 ABHD2P08910 425 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 PYGBP11216 843 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 GPD1P21695 349 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms