RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 FRMD1Q8N878 549 aa18.11■□□□□ 0.49
TOP3B-217ENST00000489581 TXNDC5Q8NBS9 432 aaKnown RBP18.11■□□□□ 0.49
TOP3B-217ENST00000489581 TTLL2Q9BWV7 592 aa18.11■□□□□ 0.49
TOP3B-217ENST00000489581 ZDHHC4Q9NPG8 344 aa18.11■□□□□ 0.49
TOP3B-217ENST00000489581 WASF3Q9UPY6 502 aa18.11■□□□□ 0.49
TOP3B-217ENST00000489581 MYH10P35580 1976 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 PLXND1Q9Y4D7 1925 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 FRMD3A2A2Y4 597 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 ZNF233A6NK53 670 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 F8VP50 259 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 SGK1O00141 431 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 TRIM66O15016 1216 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 APODP05090 189 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 DUOXA2Q1HG44 320 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 MDH1BQ5I0G3 518 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 FAM173BQ6P4H8 233 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 RHBDF2Q6PJF5 856 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 ARMCX6Q7L4S7 300 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 HS2ST1Q7LGA3 356 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 C12orf40Q86WS4 652 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 TMEFF1Q8IYR6 380 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 IL17RCQ8NAC3 791 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 DEFB124Q8NES8 71 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 OLIG1Q8TAK6 271 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 MYCBPAPQ8TBZ2 947 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 CEP295NLQ96MC4 621 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 PNKPQ96T60 521 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 MRPL45Q9BRJ2 306 aaKnown RBP18.1■□□□□ 0.49
TOP3B-217ENST00000489581 CFAP97Q9P2B7 532 aa18.1■□□□□ 0.49
TOP3B-217ENST00000489581 A0A087X0B3 334 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 SLC9A3R1O14745 358 aaPredicted RBP18.09■□□□□ 0.49
TOP3B-217ENST00000489581 MAP3K13O43283 966 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 KAT7O95251 611 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 GNL1P36915 607 aaPredicted RBP18.09■□□□□ 0.49
TOP3B-217ENST00000489581 P2RY2P41231 377 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 STAT6P42226 847 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 PPP3CCP48454 512 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 IFRD2Q12894 506 aaPredicted RBP18.09■□□□□ 0.49
TOP3B-217ENST00000489581 TAF10Q12962 218 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 RESTQ13127 1097 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 SURF1Q15526 300 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 TRIM61Q5EBN2 209 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 CCDC73Q6ZRK6 1079 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 LPCAT2Q7L5N7 544 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 GLIS3Q8NEA6 775 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 C8orf48Q96LL4 319 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 FNBP1Q96RU3 617 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 SCNM1Q9BWG6 230 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 ADAM33Q9BZ11 813 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 SNX25Q9H3E2 840 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 EHD2Q9NZN4 543 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 BCCIPQ9P287 314 aaKnown RBP eCLIP18.09■□□□□ 0.49
TOP3B-217ENST00000489581 NME7Q9Y5B8 376 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 ATRXP46100 2492 aa18.09■□□□□ 0.49
TOP3B-217ENST00000489581 ZFYVE26Q68DK2 2539 aa18.08■□□□□ 0.49
TOP3B-217ENST00000489581 ASPMQ8IZT6 3477 aa18.08■□□□□ 0.49
TOP3B-217ENST00000489581 KIAA0391O15091 583 aaKnown RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 OLFM2O95897 454 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 OAS1P00973 400 aaKnown RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 CST3P01034 146 aaPredicted RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 MBL2P11226 248 aaPredicted RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 CHRM1P11229 460 aaPredicted RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 PTGER3P43115 390 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 CACNA2D1P54289 1103 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 NOP14P78316 857 aaKnown RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 KDSRQ06136 332 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 TDRD10Q5VZ19 366 aaKnown RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 TRAPPC11Q7Z392 1133 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 CCDC65Q8IXS2 484 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 PDILTQ8N807 584 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 KDF1Q8NAX2 398 aaPredicted RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 RDH13Q8NBN7 331 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 OR6B3Q8NGW1 331 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 WHAMMQ8TF30 809 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 HMGB4Q8WW32 186 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 HPS3Q969F9 1004 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 SPACA7Q96KW9 195 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 TMEM121BQ9BXQ6 578 aaPredicted RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 NUSAP1Q9BXS6 441 aaKnown RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 POLMQ9NP87 494 aaPredicted RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 ARHGEF4Q9NR80 690 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 TMEM74BQ9NUR3 256 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 TMEM30AQ9NV96 361 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 HSPBP1Q9NZL4 362 aa18.08■□□□□ 0.48
TOP3B-217ENST00000489581 EVLQ9UI08 416 aaPredicted RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 MBD1Q9UIS9 605 aaPredicted RBP18.08■□□□□ 0.48
TOP3B-217ENST00000489581 CLDN5O00501 218 aa18.07■□□□□ 0.48
TOP3B-217ENST00000489581 ADH5P11766 374 aa18.07■□□□□ 0.48
TOP3B-217ENST00000489581 PTPN1P18031 435 aaKnown RBP18.07■□□□□ 0.48
TOP3B-217ENST00000489581 EIF2DP41214 584 aaKnown RBP18.07■□□□□ 0.48
TOP3B-217ENST00000489581 KIR2DL1P43626 348 aaPredicted RBP18.07■□□□□ 0.48
TOP3B-217ENST00000489581 MAPK8P45983 427 aa18.07■□□□□ 0.48
TOP3B-217ENST00000489581 LMAN2Q12907 356 aa18.07■□□□□ 0.48
TOP3B-217ENST00000489581 HSF5Q4G112 596 aaPredicted RBP18.07■□□□□ 0.48
TOP3B-217ENST00000489581 EOGTQ5NDL2 527 aa18.07■□□□□ 0.48
TOP3B-217ENST00000489581 WDR49Q8IV35 697 aa18.07■□□□□ 0.48
TOP3B-217ENST00000489581 PGBD3Q8N328 593 aa18.07■□□□□ 0.48
TOP3B-217ENST00000489581 KIAA1958Q8N8K9 716 aa18.07■□□□□ 0.48
TOP3B-217ENST00000489581 SLITRK1Q96PX8 696 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms