RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 FAM208BQ5VWN6 2430 aa12.71□□□□□ -0.38
SFXN3-207ENST00000489434 PTPRDP23468 1912 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 PTPRJQ12913 1337 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 A0A087X0B3 334 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 C4orf47A7E2U8 309 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.7□□□□□ -0.38
SFXN3-207ENST00000489434 K7EQS6 105 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 TACC1O75410 805 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 CLSTN1O94985 981 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 RTN3O95197 1032 aaPredicted RBP12.7□□□□□ -0.38
SFXN3-207ENST00000489434 APODP05090 189 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 CYP17A1P05093 508 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 PTPN1P18031 435 aaKnown RBP12.7□□□□□ -0.38
SFXN3-207ENST00000489434 EIF2DP41214 584 aaKnown RBP12.7□□□□□ -0.38
SFXN3-207ENST00000489434 CYP2J2P51589 502 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 USP46P62068 366 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 TAF10Q12962 218 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 BYSLQ13895 437 aaKnown RBP12.7□□□□□ -0.38
SFXN3-207ENST00000489434 DHCR24Q15392 516 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 CRY1Q16526 586 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 WDR72Q3MJ13 1102 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 PREPLQ4J6C6 727 aaPredicted RBP12.7□□□□□ -0.38
SFXN3-207ENST00000489434 NUDT18Q6ZVK8 323 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 ADGRG2Q8IZP9 1017 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 IQUBQ8NA54 791 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 PDZD8Q8NEN9 1154 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 WHAMMQ8TF30 809 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 CCDC127Q96BQ5 260 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 USP28Q96RU2 1077 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 TPSD1Q9BZJ3 242 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 POLMQ9NP87 494 aaPredicted RBP12.7□□□□□ -0.38
SFXN3-207ENST00000489434 TMEM9BQ9NQ34 198 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 CFAP97Q9P2B7 532 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 CPQQ9Y646 472 aa12.7□□□□□ -0.38
SFXN3-207ENST00000489434 MYO18AQ92614 2054 aaKnown RBP12.69□□□□□ -0.38
SFXN3-207ENST00000489434 UBE4BO95155 1302 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 LNP1A1A4G5 178 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 A8MXQ7 604 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 PHACTR2O75167 634 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 KAT7O95251 611 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 MBL2P11226 248 aaPredicted RBP12.69□□□□□ -0.38
SFXN3-207ENST00000489434 YWHAQP27348 245 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 GRIA2P42262 883 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 PI4KAP42356 2102 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 NASPP49321 788 aaPredicted RBP12.69□□□□□ -0.38
SFXN3-207ENST00000489434 DHPSP49366 369 aaPredicted RBP12.69□□□□□ -0.38
SFXN3-207ENST00000489434 PSMD6Q15008 389 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 EOGTQ5NDL2 527 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 FAM26FQ5R3K3 315 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 BTBD8Q5XKL5 378 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 LPCAT2Q7L5N7 544 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 RASSF3Q86WH2 238 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 XXYLT1Q8NBI6 393 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 RDH13Q8NBN7 331 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 B3GALNT2Q8NCR0 500 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 HPS3Q969F9 1004 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
SFXN3-207ENST00000489434 INTS4Q96HW7 963 aaKnown RBP12.69□□□□□ -0.38
SFXN3-207ENST00000489434 CGRRF1Q99675 332 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 MRPL45Q9BRJ2 306 aaKnown RBP12.69□□□□□ -0.38
SFXN3-207ENST00000489434 TRIM9Q9C026 710 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 RNF38Q9H0F5 515 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 ARHGEF4Q9NR80 690 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 AGPAT3Q9NRZ7 376 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 KBTBD4Q9NVX7 518 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 BCCIPQ9P287 314 aaKnown RBP eCLIP12.69□□□□□ -0.38
SFXN3-207ENST00000489434 CGNQ9P2M7 1197 aaKnown RBP12.69□□□□□ -0.38
SFXN3-207ENST00000489434 MYOFQ9NZM1 2061 aa12.69□□□□□ -0.38
SFXN3-207ENST00000489434 IGF2RP11717 2491 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 E2F8A0AVK6 867 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 SPTLC2O15270 562 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 ZBTB24O43167 697 aaPredicted RBP12.68□□□□□ -0.38
SFXN3-207ENST00000489434 KLF8O95600 359 aaPredicted RBP12.68□□□□□ -0.38
SFXN3-207ENST00000489434 OLFM2O95897 454 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 OAS1P00973 400 aaKnown RBP12.68□□□□□ -0.38
SFXN3-207ENST00000489434 ADH5P11766 374 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 ATICP31939 592 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 DPP6P42658 865 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 TNFRSF4P43489 277 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 CYP24A1Q07973 514 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 IFRD2Q12894 506 aaPredicted RBP12.68□□□□□ -0.38
SFXN3-207ENST00000489434 LMAN2Q12907 356 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 NUP93Q8N1F7 819 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 ALLCQ8N6M5 410 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 TXNDC5Q8NBS9 432 aaKnown RBP12.68□□□□□ -0.38
SFXN3-207ENST00000489434 GLIS3Q8NEA6 775 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 MDGA1Q8NFP4 955 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 ZNF507Q8TCN5 953 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 OVCA2Q8WZ82 227 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 PIGKQ92643 395 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 FBXO32Q969P5 355 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 DHX58Q96C10 678 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 OTUB2Q96DC9 234 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 ZNF396Q96N95 335 aaPredicted RBP12.68□□□□□ -0.38
SFXN3-207ENST00000489434 ZNF518BQ9C0D4 1074 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 NACA2Q9H009 215 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 MAGEF1Q9HAY2 307 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
SFXN3-207ENST00000489434 MTMR6Q9Y217 621 aa12.68□□□□□ -0.38
SFXN3-207ENST00000489434 SCAMP3O14828 347 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms