RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 IMPG2Q9BZV3 1241 aa13.34□□□□□ -0.27
SRRM1-216ENST00000489130 ECT2Q9H8V3 914 aa13.34□□□□□ -0.27
SRRM1-216ENST00000489130 DMAP1Q9NPF5 467 aaPredicted RBP13.34□□□□□ -0.27
SRRM1-216ENST00000489130 RMND1Q9NWS8 449 aa13.34□□□□□ -0.27
SRRM1-216ENST00000489130 DUS2Q9NX74 493 aaKnown RBP13.34□□□□□ -0.27
SRRM1-216ENST00000489130 ANAPC1Q9H1A4 1944 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 GOLGA6L4A6NEF3 574 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 K7ESF4 209 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 TNFRSF10BO14763 440 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 RTN3O95197 1032 aaPredicted RBP13.33□□□□□ -0.28
SRRM1-216ENST00000489130 TRIM49P0CI25 452 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 TRIM49CP0CI26 452 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 YWHAQP27348 245 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 GJA4P35212 333 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 GCLMP48507 274 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 IFNAR2P48551 515 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 INCA1Q0VD86 236 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 GRSF1Q12849 480 aaKnown RBP eCLIP13.33□□□□□ -0.28
SRRM1-216ENST00000489130 COBLL1Q53SF7 1204 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 ACOT1Q86TX2 421 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 SPATA20Q8TB22 786 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 KCNK16Q96T55 309 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 MED10Q9BTT4 135 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 RNF38Q9H0F5 515 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 APOBEC3GQ9HC16 384 aaKnown RBP13.33□□□□□ -0.28
SRRM1-216ENST00000489130 TMEM8AQ9HCN3 771 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 KRT82Q9NSB4 513 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 IL37Q9NZH6 218 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 HMGXB4Q9UGU5 601 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 WNT6Q9Y6F9 365 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 FAM186AA6NE01 2351 aa13.33□□□□□ -0.28
SRRM1-216ENST00000489130 RIF1Q5UIP0 2472 aaKnown RBP13.33□□□□□ -0.28
SRRM1-216ENST00000489130 FAM92AA1XBS5 289 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 LEFTY2O00292 366 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 CCDC130P13994 396 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 HOXA6P31267 233 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 GTF2H1P32780 548 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 SLC5A3P53794 718 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 ZNF658Q5TYW1 1059 aaPredicted RBP13.32□□□□□ -0.28
SRRM1-216ENST00000489130 SNX30Q5VWJ9 437 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 TTC16Q8NEE8 873 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 PDZD8Q8NEN9 1154 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 SLC2A14Q8TDB8 520 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 EXOC4Q96A65 974 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 GSDMAQ96QA5 445 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 NIF3L1Q9GZT8 377 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 CYP3A43Q9HB55 503 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 CSNK1G1Q9HCP0 422 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 C2orf42Q9NWW7 574 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 COMMD8Q9NX08 183 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 SMG5Q9UPR3 1016 aaKnown RBP13.32□□□□□ -0.28
SRRM1-216ENST00000489130 GVINP1Q7Z2Y8 2422 aa13.32□□□□□ -0.28
SRRM1-216ENST00000489130 AP1G2O75843 785 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 NFATC1O95644 943 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 EGFP01133 1207 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 DRD1P21728 446 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 PRCPP42785 496 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 TUBP50607 506 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 IFRD2Q12894 506 aaPredicted RBP13.31□□□□□ -0.28
SRRM1-216ENST00000489130 ORC1Q13415 861 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 KRT39Q6A163 491 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 LONP2Q86WA8 852 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 ZC3H3Q8IXZ2 948 aaKnown RBP13.31□□□□□ -0.28
SRRM1-216ENST00000489130 C12orf29Q8N999 325 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 ZMIZ2Q8NF64 920 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 SCAMP5Q8TAC9 235 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 FBXO32Q969P5 355 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 FAXDC2Q96IV6 333 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 TIGD1Q96MW7 591 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 TWNKQ96RR1 684 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 SMOQ99835 787 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 P2RY13Q9BPV8 354 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 HINFPQ9BQA5 517 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 LINC00597Q9H2U6 94 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 FBRSL1Q9HCM7 1045 aaKnown RBP13.31□□□□□ -0.28
SRRM1-216ENST00000489130 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.31□□□□□ -0.282e-7■■■□□ 19.2
SRRM1-216ENST00000489130 CPQQ9Y646 472 aa13.31□□□□□ -0.28
SRRM1-216ENST00000489130 PTPRZ1P23471 2315 aaPredicted RBP13.31□□□□□ -0.28
SRRM1-216ENST00000489130 HELZP42694 1942 aaKnown RBP13.31□□□□□ -0.28
SRRM1-216ENST00000489130 ZNF638Q14966 1978 aaKnown RBP13.31□□□□□ -0.28
SRRM1-216ENST00000489130 OTOGLQ3ZCN5 2332 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 CHURC1-FNTBB4DL54 471 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 CETN3O15182 167 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 CILPO75339 1184 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 BEST1O76090 585 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 SMC2O95347 1197 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 ABL1P00519 1130 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 ZDHHC11BP0C7U3 371 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 EPB41P11171 864 aaKnown RBP13.3□□□□□ -0.28
SRRM1-216ENST00000489130 TRIM21P19474 475 aaKnown RBP13.3□□□□□ -0.28
SRRM1-216ENST00000489130 MXI1P50539 228 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 GALK1P51570 392 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 DMWDQ09019 674 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 NR1H3Q13133 447 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 FBXO43Q4G163 708 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 NAIF1Q69YI7 327 aaPredicted RBP13.3□□□□□ -0.28
SRRM1-216ENST00000489130 PKN3Q6P5Z2 889 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 ELOA2Q8IYF1 753 aaPredicted RBP13.3□□□□□ -0.28
SRRM1-216ENST00000489130 DCLK2Q8N568 766 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms