RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 WHAMMQ8TF30 809 aa15.12■□□□□ 0.01
BRCA1-218ENST00000489037 USP13Q92995 863 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-218ENST00000489037 RSPRY1Q96DX4 576 aa15.12■□□□□ 0.01
BRCA1-218ENST00000489037 FAM122AQ96E09 287 aa15.12■□□□□ 0.01
BRCA1-218ENST00000489037 MSANTD3Q96H12 275 aa15.12■□□□□ 0.01
BRCA1-218ENST00000489037 C8orf33Q9H7E9 229 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-218ENST00000489037 CSNK1G1Q9HCP0 422 aa15.12■□□□□ 0.01
BRCA1-218ENST00000489037 KIF26AQ9ULI4 1882 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-218ENST00000489037 MYO16Q9Y6X6 1858 aa15.12■□□□□ 0.01
BRCA1-218ENST00000489037 ZNF840PA6NDX5 716 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 FAM170BA6NMN3 283 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 GALR2O43603 387 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-218ENST00000489037 PI15O43692 258 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 MBD3O95983 291 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 ERCC5P28715 1186 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-218ENST00000489037 MLLT6P55198 1093 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-218ENST00000489037 CT47A1Q5JQC4 288 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-218ENST00000489037 PPM1KQ8N3J5 372 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 EHBP1Q8NDI1 1231 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 PJA1Q8NG27 643 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 JAKMIP2Q96AA8 810 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 CNOT6LQ96LI5 555 aaKnown RBP15.11■□□□□ 0.01
BRCA1-218ENST00000489037 CYP2S1Q96SQ9 504 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 SMOQ99835 787 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 ARID3AQ99856 593 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 OSBPL6Q9BZF3 934 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 FOXQ1Q9C009 403 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 GKN1Q9NS71 199 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 TMEM30AQ9NV96 361 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 PIAS3Q9Y6X2 628 aa15.11■□□□□ 0.01
BRCA1-218ENST00000489037 PATJQ8NI35 1801 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 C2orf78A6NCI8 922 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 TNFRSF10BO14763 440 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 CD19P15391 556 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 MAGEA9P43362 315 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 RAD23BP54727 409 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 AMPD2Q01433 879 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 PDGFRLQ15198 375 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 DPCR1Q3MIW9 517 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 SGO2Q562F6 1265 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 HECTD3Q5T447 861 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 PPP1R26Q5T8A7 1209 aaPredicted RBP15.1■□□□□ 0.01
BRCA1-218ENST00000489037 CLEC20AQ6ZU45 233 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 CCDC105Q8IYK2 499 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 DTWD2Q8NBA8 298 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 SLC4A11Q8NBS3 891 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 SCAMP5Q8TAC9 235 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 FAM3CQ92520 227 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 ZFYVE19Q96K21 471 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 DDX23Q9BUQ8 820 aaKnown RBP15.1■□□□□ 0.01
BRCA1-218ENST00000489037 DUSP16Q9BY84 665 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 NACA2Q9H009 215 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 THAP9Q9H5L6 903 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 PNPLA8Q9NP80 782 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 LTB4R2Q9NPC1 389 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 TLR8Q9NR97 1041 aaKnown RBP15.1■□□□□ 0.01
BRCA1-218ENST00000489037 GCNT4Q9P109 453 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 HESX1Q9UBX0 185 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 CHORDC1Q9UHD1 332 aaPredicted RBP15.1■□□□□ 0.01
BRCA1-218ENST00000489037 KIAA1257Q9ULG3 409 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 ARHGAP26Q9UNA1 814 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 CCL26Q9Y258 94 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 PCDHB4Q9Y5E5 795 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 NCANO14594 1321 aa15.1■□□□□ 0.01
BRCA1-218ENST00000489037 BEST1O76090 585 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 DCNP07585 359 aaKnown RBP15.09■□□□□ 0.01
BRCA1-218ENST00000489037 MBL2P11226 248 aaPredicted RBP15.09■□□□□ 0.01
BRCA1-218ENST00000489037 VDRP11473 427 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 CD72P21854 359 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 IFNAR2P48551 515 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 MTF1Q14872 753 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 ITPRIPL2Q3MIP1 535 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 ARHGAP17Q68EM7 881 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 SASS6Q6UVJ0 657 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 RALGPS2Q86X27 583 aaPredicted RBP15.09■□□□□ 0.01
BRCA1-218ENST00000489037 DDX42Q86XP3 938 aaKnown RBP eCLIP15.09■□□□□ 0.01
BRCA1-218ENST00000489037 ZMIZ2Q8NF64 920 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 PRSS33Q8NF86 280 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 GPT2Q8TD30 523 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 SH3RF2Q8TEC5 729 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 EXOC4Q96A65 974 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 FAM81BQ96LP2 452 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 LRRC3BQ96PB8 259 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 IL37Q9NZH6 218 aa15.09■□□□□ 0.01
BRCA1-218ENST00000489037 NDRG2Q9UN36 371 aaKnown RBP15.09■□□□□ 0.01
BRCA1-218ENST00000489037 ARNTLO00327 626 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 TCF3P15923 654 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 ACO1P21399 889 aaKnown RBP15.08■□□□□ 0
BRCA1-218ENST00000489037 SLC7A9P82251 487 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 NR1H3Q13133 447 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 RUNX3Q13761 415 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 TMEM270Q6UE05 265 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 GBP6Q6ZN66 633 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 ANKRD52Q8NB46 1076 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 TTC8Q8TAM2 541 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 SLC22A12Q96S37 553 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 UBXN6Q9BZV1 441 aa15.08■□□□□ 0
BRCA1-218ENST00000489037 INTS2Q9H0H0 1204 aaKnown RBP15.08■□□□□ 0
BRCA1-218ENST00000489037 DUS2Q9NX74 493 aaKnown RBP15.08■□□□□ 0
BRCA1-218ENST00000489037 GTSE1Q9NYZ3 720 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms