RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 SMYD4Q8IYR2 804 aaPredicted RBP12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 FUKQ8N0W3 1084 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 NUP93Q8N1F7 819 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 SCAMP5Q8TAC9 235 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 TAF4BQ92750 862 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 ATP2A3Q93084 1043 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 EEF2KMTQ96G04 330 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 SLITRK1Q96PX8 696 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 P2RY13Q9BPV8 354 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 MMRN2Q9H8L6 949 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 SMPD4Q9NXE4 827 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 HMGXB4Q9UGU5 601 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 CHORDC1Q9UHD1 332 aaPredicted RBP12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 ATP8B3O60423 1300 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 GVINP1Q7Z2Y8 2422 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 GOLGA6L4A6NEF3 574 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 SCAMP3O14828 347 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 MAPK13O15264 365 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 HRO43593 1189 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 AP1G2O75843 785 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 PAPSS2O95340 614 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 ASS1P00966 412 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 KRT13P13646 458 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 CCDC130P13994 396 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 PFKLP17858 780 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 PSMC2P35998 433 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 ASPAP45381 313 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 ID4P47928 161 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 SLC7A9P82251 487 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 SRSF5Q13243 272 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 INTS8Q75QN2 995 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 FMR1NBQ8N0W7 255 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 CRYBG2Q8N1P7 616 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 C12orf29Q8N999 325 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 SLC2A14Q8TDB8 520 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 TAS1R2Q8TE23 839 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 FBXO32Q969P5 355 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 KRT82Q9NSB4 513 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 POLR3BQ9NW08 1133 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 CPQQ9Y646 472 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 GPR179Q6PRD1 2367 aa12.67□□□□□ -0.38
CCHCR1-215ENST00000488920 NUP210Q8TEM1 1887 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 TNFRSF10BO14763 440 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 BEST1O76090 585 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 RTN3O95197 1032 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 OAS1P00973 400 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 TCF3P15923 654 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 DRD1P21728 446 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 PXNP49023 591 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 NR1H3Q13133 447 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 SIM2Q14190 667 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 ZCWPW2Q504Y3 356 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 PRR23BQ6ZRT6 265 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 LONP2Q86WA8 852 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 SECISBP2LQ93073 1101 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 SMARCD1Q96GM5 515 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 SMOQ99835 787 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 APOBEC3GQ9HC16 384 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 DMAP1Q9NPF5 467 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 FAM49BQ9NUQ9 324 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 CFAP97Q9P2B7 532 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 RAB23Q9ULC3 237 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 PATJQ8NI35 1801 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 ZNF292O60281 2723 aa12.66□□□□□ -0.38
CCHCR1-215ENST00000488920 COCHO43405 550 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 ATG13O75143 517 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 RNF40O75150 1001 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 NFATC1O95644 943 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 OLFM2O95897 454 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 MBL2P11226 248 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 CD58P19256 250 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 ADORA2BP29275 332 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 PRCPP42785 496 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 SLC5A3P53794 718 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 MAP3K7CLP57077 242 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 NUCB2P80303 420 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 FILIP1Q7Z7B0 1213 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 UNC93AQ86WB7 457 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 ADGRG2Q8IZP9 1017 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 PDZD8Q8NEN9 1154 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 ZMIZ2Q8NF64 920 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 EZH1Q92800 747 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 ERCC4Q92889 916 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 CD101Q93033 1021 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 EXOC4Q96A65 974 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 RMDN1Q96DB5 314 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 TWNKQ96RR1 684 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 IMPG2Q9BZV3 1241 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 IL37Q9NZH6 218 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 GMIPQ9P107 970 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 SLC8A2Q9UPR5 921 aa12.65□□□□□ -0.38
CCHCR1-215ENST00000488920 CETN3O15182 167 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 HOXA6P31267 233 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 GTF2H1P32780 548 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 PGFP49763 221 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 ENPEPQ07075 957 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 HECTD3Q5T447 861 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 WDR5BQ86VZ2 330 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms