RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 UBL4BQ8N7F7 174 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 FNIP1Q8TF40 1166 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 KCTD13Q8WZ19 329 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 IGSF21Q96ID5 467 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 PBKQ96KB5 322 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 CSNK1G1Q9HCP0 422 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 V9GYY5 206 aaPredicted RBP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 CEP104O60308 925 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 CAPN15O75808 1086 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 EFEMP2O95967 443 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 TCF4P15884 667 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 ZNF211Q13398 564 aaPredicted RBP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 PIGHQ14442 188 aaPredicted RBP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 TMEM240Q5SV17 173 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 CCDC181Q5TID7 509 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 SPATA2LQ8IUW3 424 aaPredicted RBP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 NIPA2Q8N8Q9 360 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 TTPALQ9BTX7 342 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 CARD9Q9H257 536 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 LRRC4Q9HBW1 653 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 LCMT1Q9UIC8 334 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 PCDHA3Q9Y5H8 950 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 MYO16Q9Y6X6 1858 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 CTAGE15A4D2H0 777 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 C2CD4BA6NLJ0 364 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 HHLA1C9JL84 531 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 CTAGE8P0CG41 777 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 PSEN1P49768 467 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 NDUFV1P49821 464 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 TKTL1P51854 596 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 ADCY1Q08828 1119 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 CFAP221Q4G0U5 840 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 PRSS55Q6UWB4 352 aaPredicted RBP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 RSPO2Q6UXX9 243 aaPredicted RBP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 C4orf50Q6ZRC1 276 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 CTAGE6Q86UF2 777 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 CTAGE4Q8IX94 777 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 RNF168Q8IYW5 571 aaPredicted RBP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 DCP1BQ8IZD4 617 aaKnown RBP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 NDRG1Q92597 394 aaKnown RBP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 ZNF558Q96NG5 402 aa11.47□□□□□ -0.57
COL21A1-211ENST00000488912 DMAP1Q9NPF5 467 aaPredicted RBP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 ABI2Q9NYB9 513 aaPredicted RBP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 ZMYND8Q9ULU4 1186 aaPredicted RBP11.47□□□□□ -0.57
COL21A1-211ENST00000488912 GJB5O95377 273 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 GPD1P21695 349 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 CYP2F1P24903 491 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 SSR1P43307 286 aaKnown RBP11.46□□□□□ -0.57
COL21A1-211ENST00000488912 ZNF143P52747 638 aaPredicted RBP11.46□□□□□ -0.57
COL21A1-211ENST00000488912 RAB41Q5JT25 222 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 AADACL2Q6P093 401 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 CC2D1AQ6P1N0 951 aaPredicted RBP11.46□□□□□ -0.57
COL21A1-211ENST00000488912 PSRC1Q6PGN9 363 aaPredicted RBP11.46□□□□□ -0.57
COL21A1-211ENST00000488912 SLC26A9Q7LBE3 791 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 SIX6OS1Q8N1H7 587 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 SLC39A11Q8N1S5 342 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 ARFGAP1Q8N6T3 406 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 COLGALT1Q8NBJ5 622 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 RXFP2Q8WXD0 754 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 RNPC3Q96LT9 517 aaKnown RBP11.46□□□□□ -0.57
COL21A1-211ENST00000488912 PGLYRP2Q96PD5 576 aa11.46□□□□□ -0.57
COL21A1-211ENST00000488912 OR6C75A6NL08 312 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 EFCAB8A8MWE9 144 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 PSTPIP1O43586 416 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 TBC1D4O60343 1298 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 LRCH4O75427 683 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 PDGFRAP16234 1089 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 LAG3P18627 525 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 GJC1P36383 396 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 SCNN1AP37088 669 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 PAFAH1B1P43034 410 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 ARPP19P56211 112 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 RWDD2BP57060 319 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 C2orf54Q08AI8 447 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 C15orf59Q2T9L4 293 aaPredicted RBP11.46□□□□□ -0.58
COL21A1-211ENST00000488912 USP41Q3LFD5 358 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 ANKS3Q6ZW76 656 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 ZNF572Q7Z3I7 529 aaPredicted RBP11.46□□□□□ -0.58
COL21A1-211ENST00000488912 RHOT1Q8IXI2 618 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 RASGEF1CQ8N431 466 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 ACTRT1Q8TDG2 376 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 CFAP57Q96MR6 1250 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 ULBP1Q9BZM6 244 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 RNF14Q9UBS8 474 aa11.46□□□□□ -0.58
COL21A1-211ENST00000488912 PGRMC1O00264 195 aaKnown RBP11.45□□□□□ -0.58
COL21A1-211ENST00000488912 PYGMP11217 842 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 CPB1P15086 417 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 MRPS5P82675 430 aaKnown RBP11.45□□□□□ -0.58
COL21A1-211ENST00000488912 HTRA4P83105 476 aaPredicted RBP11.45□□□□□ -0.58
COL21A1-211ENST00000488912 NFE2Q16621 373 aaPredicted RBP11.45□□□□□ -0.58
COL21A1-211ENST00000488912 RAB6CQ53S08 254 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 SH3PXD2AQ5TCZ1 1133 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 TXNRD3NBQ6F5E7 133 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 FBXO38Q6PIJ6 1188 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 RSRC2Q7L4I2 434 aaKnown RBP11.45□□□□□ -0.58
COL21A1-211ENST00000488912 TTC9BQ8N6N2 239 aa11.45□□□□□ -0.58
COL21A1-211ENST00000488912 NOA1Q8NC60 698 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms