RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 ZNF81P51508 661 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 ALDH5A1P51649 535 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-212ENST00000488896 CACNB3P54284 484 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 RPS16P62249 146 aaKnown RBP5.85□□□□□ -1.47
PTPN4-212ENST00000488896 TUBA4AP68366 448 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 MTX3Q5HYI7 312 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 CEP78Q5JTW2 689 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 CERCAMQ5T4B2 595 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 KIAA1614Q5VZ46 1190 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 FCRL6Q6DN72 434 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 SERPINA13PQ6UXR4 307 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 C14orf80Q86SX3 495 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 TRIM43Q96BQ3 446 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-212ENST00000488896 ZBTB45Q96K62 511 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-212ENST00000488896 QTRT1Q9BXR0 403 aaKnown RBP5.85□□□□□ -1.47
PTPN4-212ENST00000488896 CIPCQ9C0C6 399 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 FLRT1Q9NZU1 646 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 LPAR3Q9UBY5 353 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 AFF4Q9UHB7 1163 aaKnown RBP5.85□□□□□ -1.47
PTPN4-212ENST00000488896 CDY1Q9Y6F8 540 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 RAB27BO00194 218 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 PRKCBP05771 671 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 PTDSS1P48651 473 aaKnown RBP5.84□□□□□ -1.47
PTPN4-212ENST00000488896 FMO1Q01740 532 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 CCNIQ14094 377 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 INSCQ1MX18 579 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 DARS2Q6PI48 645 aaKnown RBP5.84□□□□□ -1.47
PTPN4-212ENST00000488896 KIRREL2Q6UWL6 708 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 YTHDF3Q7Z739 585 aaKnown RBP5.84□□□□□ -1.47
PTPN4-212ENST00000488896 WDR75Q8IWA0 830 aaKnown RBP5.84□□□□□ -1.47
PTPN4-212ENST00000488896 SIRT6Q8N6T7 355 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 TERB1Q8NA31 727 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 ZNF778Q96MU6 729 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 BHMT2Q9H2M3 363 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 ZNF287Q9HBT7 754 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 ITGB1BP2Q9UKP3 347 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 GABRQQ9UN88 632 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 USP22Q9UPT9 525 aa5.84□□□□□ -1.47
PTPN4-212ENST00000488896 DRG1Q9Y295 367 aaKnown RBP5.84□□□□□ -1.47
PTPN4-212ENST00000488896 LOC102723971A0A1B0GUV8 181 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 GOLGA6CA6NDK9 693 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 GOLGA6BA6NDN3 693 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 MBD3L4A6NDZ8 208 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-212ENST00000488896 MBD3L3A6NE82 208 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-212ENST00000488896 ISM1B1AKI9 464 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 TPP1O14773 563 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 GOLGA6DP0CG33 693 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 HGFP14210 728 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 KLRC1P26715 233 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 MTHFSP49914 203 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 STK3Q13188 491 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 ZNF626Q68DY1 528 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 SMG7Q92540 1137 aaKnown RBP5.83□□□□□ -1.48
PTPN4-212ENST00000488896 C5orf34Q96MH7 638 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 ASB2Q96Q27 587 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 LRRC27Q9C0I9 530 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 XPNPEP3Q9NQH7 507 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 GOLGA6AQ9NYA3 693 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 AMFRQ9UKV5 643 aa5.83□□□□□ -1.48
PTPN4-212ENST00000488896 COL3A1P02461 1466 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-212ENST00000488896 FRS3O43559 492 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 MGEA5O60502 916 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 TJP3O95049 919 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 MYF5P13349 255 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 KELP23276 732 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 PEX2P28328 305 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 RENBPP51606 427 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 BCAT1P54687 386 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 PSG6Q00889 435 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 GFOD2Q3B7J2 385 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 SUPT20HL1Q3ZLR7 823 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 RNASE12Q5GAN4 147 aaKnown RBP5.82□□□□□ -1.48
PTPN4-212ENST00000488896 CNGA4Q8IV77 575 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 NMD3Q96D46 503 aaKnown RBP5.82□□□□□ -1.48
PTPN4-212ENST00000488896 RITA1Q96K30 269 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 MMS19Q96T76 1030 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 THAP7Q9BT49 309 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-212ENST00000488896 NRIP3Q9NQ35 241 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 PDGFCQ9NRA1 345 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 TFCP2L1Q9NZI6 479 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 COL20A1Q9P218 1284 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 DNMT3BQ9UBC3 853 aaKnown RBP5.82□□□□□ -1.48
PTPN4-212ENST00000488896 MID2Q9UJV3 735 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 PAXBP1Q9Y5B6 917 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 PCDHGB6Q9Y5F9 930 aa5.82□□□□□ -1.48
PTPN4-212ENST00000488896 GOLIM4O00461 696 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 PPP6CO00743 305 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 RRP9O43818 475 aaKnown RBP5.81□□□□□ -1.48
PTPN4-212ENST00000488896 PMPCBO75439 489 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 PIAS2O75928 621 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 LATS1O95835 1130 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 ATF3P18847 181 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 CERS1P27544 350 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 UQCRC1P31930 480 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 GKP32189 559 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 ARHGAP25P42331 645 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 SUMO2P61956 95 aaKnown RBP5.81□□□□□ -1.48
PTPN4-212ENST00000488896 ARHGEF7Q14155 803 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 SLC29A2Q14542 456 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 POLD3Q15054 466 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms