RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 WDTC1Q8N5D0 677 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 VN1R2Q8NFZ6 395 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 SLC35F5Q8WV83 523 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 PPP1R13BQ96KQ4 1090 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 C8orf48Q96LL4 319 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 CPXM1Q96SM3 734 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 MIS12Q9H081 205 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 PLEKHA4Q9H4M7 779 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 HSFX1Q9UBD0 423 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 TJP2Q9UDY2 1190 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 DPP7Q9UHL4 492 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 HELZP42694 1942 aaKnown RBP12.98□□□□□ -0.33
TRAIP-209ENST00000488860 HHLA1C9JL84 531 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 ZMYND10O75800 440 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 IPO7O95373 1038 aaKnown RBP12.98□□□□□ -0.33
TRAIP-209ENST00000488860 GLP2RO95838 553 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 ERBB2P04626 1255 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 FOSL2P15408 326 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 TKTL1P51854 596 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 SPA17Q15506 151 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 ASTE1Q2TB18 679 aaPredicted RBP12.98□□□□□ -0.33
TRAIP-209ENST00000488860 ACAD10Q6JQN1 1059 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 GPR153Q6NV75 609 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 ALKBH5Q6P6C2 394 aaKnown RBP12.98□□□□□ -0.33
TRAIP-209ENST00000488860 DENND5BQ6ZUT9 1274 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 PHLDB2Q86SQ0 1253 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 NUP93Q8N1F7 819 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 EFHBQ8N7U6 833 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 SPATA17Q96L03 361 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 CDX2Q99626 313 aaPredicted RBP12.98□□□□□ -0.33
TRAIP-209ENST00000488860 DESI2Q9BSY9 194 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 APOL5Q9BWW9 433 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 ULBP1Q9BZM6 244 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 PNPLA8Q9NP80 782 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 DZANK1Q9NVP4 752 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 CLDND1Q9NY35 253 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 ADAM22Q9P0K1 906 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 NAGPAQ9UK23 515 aa12.98□□□□□ -0.33
TRAIP-209ENST00000488860 GOLGA8SH3BPF8 625 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 ARHGAP6O43182 974 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
TRAIP-209ENST00000488860 RTN2O75298 545 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 RTN3O95197 1032 aaPredicted RBP12.97□□□□□ -0.33
TRAIP-209ENST00000488860 NDUFA10O95299 355 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 FTLP02792 175 aaPredicted RBP12.97□□□□□ -0.33
TRAIP-209ENST00000488860 CSH1P0DML2 217 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 CSH2P0DML3 217 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 ABCB4P21439 1286 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 ACADSBP45954 432 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 SNX16P57768 344 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 USP46P62068 366 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 CCDC85BQ15834 202 aaPredicted RBP12.97□□□□□ -0.33
TRAIP-209ENST00000488860 RARS2Q5T160 578 aaKnown RBP12.97□□□□□ -0.33
TRAIP-209ENST00000488860 OR6B2Q6IFH4 312 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 PPP1R2P3Q6NXS1 205 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 FAM183BPQ6ZVS7 135 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 ITIH5Q86UX2 942 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 C12orf76Q8N812 135 aaPredicted RBP12.97□□□□□ -0.33
TRAIP-209ENST00000488860 ACRBPQ8NEB7 543 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 SCAMP5Q8TAC9 235 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 CLEC4CQ8WTT0 213 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 HDAC7Q8WUI4 952 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 PPM1EQ8WY54 764 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 KCTD13Q8WZ19 329 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 FBXO32Q969P5 355 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 ZNF653Q96CK0 615 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 HSFY1Q96LI6 401 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 GUCD1Q96NT3 240 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 KCNF1Q9H3M0 494 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 SFXN1Q9H9B4 322 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 ZDHHC7Q9NXF8 308 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 DENND4AQ7Z401 1863 aa12.97□□□□□ -0.33
TRAIP-209ENST00000488860 NOTCH4Q99466 2003 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 CCDC195A0A1B0GUA6 201 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 EIF3CLB5ME19 914 aaKnown RBP12.96□□□□□ -0.33
TRAIP-209ENST00000488860 TNFRSF10BO14763 440 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 ZNF263O14978 683 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 XYLBO75191 536 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 C1RP00736 705 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 CALB1P05937 261 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 USP17L7P0C7H9 530 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 POU3F3P20264 500 aaPredicted RBP12.96□□□□□ -0.33
TRAIP-209ENST00000488860 MMP8P22894 467 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 YWHAQP27348 245 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 HOXA9P31269 272 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 SKIV2LQ15477 1246 aaKnown RBP12.96□□□□□ -0.33
TRAIP-209ENST00000488860 TMC5Q6UXY8 1006 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 TOGARAM2Q6ZUX3 1019 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 MON1BQ7L1V2 547 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 PHF13Q86YI8 300 aaPredicted RBP12.96□□□□□ -0.33
TRAIP-209ENST00000488860 STK32AQ8WU08 396 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 NDRG1Q92597 394 aaKnown RBP12.96□□□□□ -0.33
TRAIP-209ENST00000488860 PSMG2Q969U7 264 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 C18orf8Q96DM3 657 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 ZNF512Q96ME7 567 aaPredicted RBP12.96□□□□□ -0.33
TRAIP-209ENST00000488860 EIF3CQ99613 913 aaKnown RBP12.96□□□□□ -0.33
TRAIP-209ENST00000488860 CORO1BQ9BR76 489 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 SLC4A5Q9BY07 1137 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 PACSIN1Q9BY11 444 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 UBXN6Q9BZV1 441 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms