RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 ARL13BQ3SXY8 428 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 PREPLQ4J6C6 727 aaPredicted RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 IZUMO3Q5VZ72 239 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 LAYNQ6UX15 382 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 RNF44Q7L0R7 432 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 KCTD20Q7Z5Y7 419 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 ADGRG5Q8IZF4 528 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 FAM9AQ8IZU1 332 aaPredicted RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 SLC30A5Q8TAD4 765 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 HASPINQ8TF76 798 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 LPIN2Q92539 896 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 SNX19Q92543 992 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 LRRC46Q96FV0 321 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 FBXL20Q96IG2 436 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 ARPC5LQ9BPX5 153 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 CDC23Q9UJX2 597 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 ADAM21Q9UKJ8 722 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 COMMD10Q9Y6G5 202 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 ARID4BQ4LE39 1312 aaPredicted RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 CCDC151A5D8V7 595 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 E7ENX8 843 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 FGF18O76093 207 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 ATXN1LP0C7T5 689 aaKnown RBP3.91□□□□□ -1.78
CD46-215ENST00000488596 SETSIPP0DME0 302 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 XRCC6P12956 609 aaKnown RBP eCLIP3.91□□□□□ -1.78
CD46-215ENST00000488596 ITGALP20701 1170 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 KLRC1P26715 233 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 VIPR2P41587 438 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 HNRNPMP52272 730 aaKnown RBP eCLIP3.91□□□□□ -1.781e-7■■■■■ 27.7
CD46-215ENST00000488596 SP2Q02086 613 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 TAP2Q03519 686 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 KRT17Q04695 432 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 CHAF1AQ13111 956 aaPredicted RBP3.91□□□□□ -1.78
CD46-215ENST00000488596 PTCHD3Q3KNS1 767 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 RBM20Q5T481 1227 aaKnown RBP3.91□□□□□ -1.78
CD46-215ENST00000488596 ARHGAP40Q5TG30 622 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 VPS53Q5VIR6 699 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 GGT6Q6P531 493 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 AMIGO2Q86SJ2 522 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 GAS2L3Q86XJ1 694 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 TXLNBQ8N3L3 684 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 DEPTORQ8TB45 409 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 BRI3BPQ8WY22 251 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 PPP2R3CQ969Q6 453 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 IQCDQ96DY2 449 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 MOGAT1Q96PD6 335 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 AMBRA1Q9C0C7 1298 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 PLCB1Q9NQ66 1216 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 ZSCAN32Q9NX65 697 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 MYO1AQ9UBC5 1043 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 ZNF212Q9UDV6 495 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 MAN2B2Q9Y2E5 1009 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 NEU2Q9Y3R4 380 aa3.91□□□□□ -1.78
CD46-215ENST00000488596 A0A0B4J269 797 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 ABHD14A-ACY1A0A1B0GW23 586 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 A0A1W2PPC4 97 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 ADM5C9JUS6 153 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 F5H423 210 aaPredicted RBP3.9□□□□□ -1.79
CD46-215ENST00000488596 IKBKBO14920 756 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 TPD52L2O43399 206 aaKnown RBP3.9□□□□□ -1.79
CD46-215ENST00000488596 THAP12O43422 761 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 TRIAP1O43715 76 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 PRKCGP05129 697 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 PDHA1P08559 390 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 CYP2C9P11712 490 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 IL1R2P27930 398 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 WNT3P56703 355 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 MYO1EQ12965 1108 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 TUBB3Q13509 450 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 SLC29A2Q14542 456 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 HLXQ14774 488 aaPredicted RBP3.9□□□□□ -1.79
CD46-215ENST00000488596 NPY5RQ15761 445 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 SRSF7Q16629 238 aaKnown RBP eCLIP3.9□□□□□ -1.79
CD46-215ENST00000488596 FCRLBQ6BAA4 426 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 YAF2Q8IY57 180 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 TOR1AIP2Q8NFQ8 470 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 BPIFB1Q8TDL5 484 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 ZNF566Q969W8 418 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 PTDSS2Q9BVG9 487 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 SERHLQ9NQF3 203 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 XPNPEP3Q9NQH7 507 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 INTS13Q9NVM9 706 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 SERTAD3Q9UJW9 196 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 NDRG4Q9ULP0 352 aaKnown RBP3.9□□□□□ -1.79
CD46-215ENST00000488596 PADI4Q9UM07 663 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 ST3GAL5Q9UNP4 418 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 SHOC2Q9UQ13 582 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 CEP83Q9Y592 693 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 SPATA31A3Q5VYP0 1347 aa3.9□□□□□ -1.79
CD46-215ENST00000488596 LOC102723971A0A1B0GUV8 181 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 LINC00473A8K010 186 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 VWC2LB2RUY7 222 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 PPM1DO15297 605 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 RGS10O43665 173 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 ORC4O43929 436 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 SOAT2O75908 522 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 RASAL1O95294 804 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 NDST3O95803 873 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 A1BGP04217 495 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 CHRM2P08172 466 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms