RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 KAT7O95251 611 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 OAS1P00973 400 aaKnown RBP20.31■□□□□ 0.84
GGPS1-206ENST00000488594 C1QTNF9P0C862 333 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 GNL1P36915 607 aaPredicted RBP20.31■□□□□ 0.84
GGPS1-206ENST00000488594 P2RY2P41231 377 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 RESTQ13127 1097 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 SPDYCQ5MJ68 293 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 TDRD10Q5VZ19 366 aaKnown RBP20.31■□□□□ 0.84
GGPS1-206ENST00000488594 CBWD2Q8IUF1 395 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 ALLCQ8N6M5 410 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 IL17RCQ8NAC3 791 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 KDF1Q8NAX2 398 aaPredicted RBP20.31■□□□□ 0.84
GGPS1-206ENST00000488594 ELOVL4Q9GZR5 314 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 SMPD4Q9NXE4 827 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 TBC1D14Q9P2M4 693 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 WASF3Q9UPY6 502 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 ANAPC1Q9H1A4 1944 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 TMEM8BA6NDV4 472 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 MAP3K13O43283 966 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 KLF8O95600 359 aaPredicted RBP20.3■□□□□ 0.84
GGPS1-206ENST00000488594 ABL1P00519 1130 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 GRIA2P42262 883 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 TAF10Q12962 218 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 MDH1BQ5I0G3 518 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 TMEM92Q6UXU6 159 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 HS2ST1Q7LGA3 356 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 TRAPPC11Q7Z392 1133 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 TXNDC5Q8NBS9 432 aaKnown RBP20.3■□□□□ 0.84
GGPS1-206ENST00000488594 NUSAP1Q9BXS6 441 aaKnown RBP20.3■□□□□ 0.84
GGPS1-206ENST00000488594 ADAM33Q9BZ11 813 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 LRRC27Q9C0I9 530 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 HSPBP1Q9NZL4 362 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 CFAP97Q9P2B7 532 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 MYO16Q9Y6X6 1858 aa20.3■□□□□ 0.84
GGPS1-206ENST00000488594 TIE1P35590 1138 aa20.29■□□□□ 0.84
GGPS1-206ENST00000488594 TNFRSF4P43489 277 aa20.29■□□□□ 0.84
GGPS1-206ENST00000488594 PREPLQ4J6C6 727 aaPredicted RBP20.29■□□□□ 0.84
GGPS1-206ENST00000488594 TRIM61Q5EBN2 209 aa20.29■□□□□ 0.84
GGPS1-206ENST00000488594 RHBDF2Q6PJF5 856 aa20.29■□□□□ 0.84
GGPS1-206ENST00000488594 SYT12Q8IV01 421 aa20.29■□□□□ 0.84
GGPS1-206ENST00000488594 PDZD8Q8NEN9 1154 aa20.29■□□□□ 0.84
GGPS1-206ENST00000488594 OR6B3Q8NGW1 331 aa20.29■□□□□ 0.84
GGPS1-206ENST00000488594 OTUB2Q96DC9 234 aa20.29■□□□□ 0.84
GGPS1-206ENST00000488594 ARHGEF4Q9NR80 690 aa20.29■□□□□ 0.84
GGPS1-206ENST00000488594 BCCIPQ9P287 314 aaKnown RBP eCLIP20.29■□□□□ 0.84
GGPS1-206ENST00000488594 ZMIZ1Q9ULJ6 1067 aa20.29■□□□□ 0.84
GGPS1-206ENST00000488594 CIZ1Q9ULV3 898 aaPredicted RBP20.29■□□□□ 0.84
GGPS1-206ENST00000488594 HELZP42694 1942 aaKnown RBP20.28■□□□□ 0.84
GGPS1-206ENST00000488594 E2F8A0AVK6 867 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 SGK1O00141 431 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 MBL2P11226 248 aaPredicted RBP20.28■□□□□ 0.84
GGPS1-206ENST00000488594 CHRM1P11229 460 aaPredicted RBP20.28■□□□□ 0.84
GGPS1-206ENST00000488594 ADH5P11766 374 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 HNRNPLP14866 589 aaKnown RBP eCLIP20.28■□□□□ 0.843e-6■□□□□ 10.6
GGPS1-206ENST00000488594 HOXD12P35452 270 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 KIR2DL1P43626 348 aaPredicted RBP20.28■□□□□ 0.84
GGPS1-206ENST00000488594 SLC6A11P48066 632 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 TNNC1P63316 161 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 UAP1L1Q3KQV9 507 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 ABCA7Q8IZY2 2146 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 KCNV2Q8TDN2 545 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 OVCA2Q8WZ82 227 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 FNBP1Q96RU3 617 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 MRPL45Q9BRJ2 306 aaKnown RBP20.28■□□□□ 0.84
GGPS1-206ENST00000488594 PANK2Q9BZ23 570 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 TNMDQ9H2S6 317 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 SLC32A1Q9H598 525 aa20.28■□□□□ 0.84
GGPS1-206ENST00000488594 NUP205Q92621 2012 aa20.27■□□□□ 0.84
GGPS1-206ENST00000488594 ANTXRLA6NF34 631 aa20.27■□□□□ 0.84
GGPS1-206ENST00000488594 EIF3DO15371 548 aaKnown RBP eCLIP20.27■□□□□ 0.84
GGPS1-206ENST00000488594 PTPN1P18031 435 aaKnown RBP20.27■□□□□ 0.84
GGPS1-206ENST00000488594 TNNI1P19237 187 aa20.27■□□□□ 0.84
GGPS1-206ENST00000488594 CEBPZQ03701 1054 aaKnown RBP20.27■□□□□ 0.84
GGPS1-206ENST00000488594 SNRNP35Q16560 246 aaKnown RBP20.27■□□□□ 0.84
GGPS1-206ENST00000488594 RLN3Q8WXF3 142 aa20.27■□□□□ 0.84
GGPS1-206ENST00000488594 LAMA1P25391 3075 aa20.27■□□□□ 0.83
GGPS1-206ENST00000488594 A0A087X0B3 334 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 RTN3O95197 1032 aaPredicted RBP20.26■□□□□ 0.83
GGPS1-206ENST00000488594 DLATP10515 647 aaKnown RBP20.26■□□□□ 0.83
GGPS1-206ENST00000488594 YWHAQP27348 245 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 GAD2Q05329 585 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 CUL4AQ13619 759 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 SLC39A14Q15043 492 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 WDR72Q3MJ13 1102 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 LYSMD4Q5XG99 296 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 BTBD8Q5XKL5 378 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 SLC23A3Q6PIS1 610 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 NUDT18Q6ZVK8 323 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 TRMT11Q7Z4G4 463 aaKnown RBP20.26■□□□□ 0.83
GGPS1-206ENST00000488594 C12orf40Q86WS4 652 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 SFTPA1Q8IWL2 248 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 TMEFF1Q8IYR6 380 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 NUP93Q8N1F7 819 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 B3GALNT2Q8NCR0 500 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 DUSP9Q99956 384 aaKnown RBP20.26■□□□□ 0.83
GGPS1-206ENST00000488594 TMEM121BQ9BXQ6 578 aaPredicted RBP20.26■□□□□ 0.83
GGPS1-206ENST00000488594 ZNF518BQ9C0D4 1074 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 THADAQ6YHU6 1953 aa20.26■□□□□ 0.83
GGPS1-206ENST00000488594 FAM208BQ5VWN6 2430 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms