RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 BST2Q10589 180 aaKnown RBP13.38□□□□□ -0.27
NELFE-209ENST00000488426 GLE1Q53GS7 698 aaKnown RBP13.38□□□□□ -0.27
NELFE-209ENST00000488426 NOMO2Q5JPE7 1267 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 SEL1L2Q5TEA6 688 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 SLC35F5Q8WV83 523 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 MRPL38Q96DV4 380 aaKnown RBP13.38□□□□□ -0.27
NELFE-209ENST00000488426 SLC4A5Q9BY07 1137 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 PARD6BQ9BYG5 372 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 RBM12Q9NTZ6 932 aaKnown RBP13.38□□□□□ -0.27
NELFE-209ENST00000488426 CACNG4Q9UBN1 327 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 FNDC1Q4ZHG4 1894 aaPredicted RBP13.38□□□□□ -0.27
NELFE-209ENST00000488426 TBKBP1A7MCY6 615 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 B3GAT3O94766 335 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 CYP11A1P05108 521 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 ITGB1P05556 798 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 RHOXF2BP0C7M4 288 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 MCM3P25205 808 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 MARCKSL1P49006 195 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 TCEAL5Q5H9L2 206 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 CLLU1OSQ5K130 101 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 DCLRE1AQ6PJP8 1040 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 CPNE8Q86YQ8 564 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 RHOT1Q8IXI2 618 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 KLHL23Q8NBE8 558 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 HLA-CQ95604 372 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 HNRNPABQ99729 332 aaKnown RBP13.38□□□□□ -0.27
NELFE-209ENST00000488426 RHOXF2Q9BQY4 288 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 ST7Q9NRC1 585 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 TJP2Q9UDY2 1190 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 DSEQ9UL01 958 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 RAB21Q9UL25 225 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 LRFN2Q9ULH4 789 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 KIAA1671Q9BY89 1806 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 GOLGA8SH3BPF8 625 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 HCRTO43612 131 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 GJB6O95452 261 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 CCDC130P13994 396 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 PTPN1P18031 435 aaKnown RBP13.37□□□□□ -0.27
NELFE-209ENST00000488426 IRS1P35568 1242 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 DSC1Q08554 894 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 ZNF252P-AS1Q0IIN9 211 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 PPP2R5EQ16537 467 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 TIGD5Q53EQ6 642 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 WDR93Q6P2C0 686 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 FBXO38Q6PIJ6 1188 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 TMEM110Q86TL2 294 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 ZDHHC17Q8IUH5 632 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 CMTR2Q8IYT2 770 aaKnown RBP13.37□□□□□ -0.27
NELFE-209ENST00000488426 SPPL3Q8TCT6 385 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 RSPH1Q8WYR4 309 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 SAMD11Q96NU1 681 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 PAAF1Q9BRP4 392 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 EPC1Q9H2F5 836 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
NELFE-209ENST00000488426 DDX43Q9NXZ2 648 aaKnown RBP13.37□□□□□ -0.27
NELFE-209ENST00000488426 CDH9Q9ULB4 789 aa13.37□□□□□ -0.27
NELFE-209ENST00000488426 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.36□□□□□ -0.27
NELFE-209ENST00000488426 E5RJQ4 531 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 TMEM189-UBE2V1I3L0A0 370 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 M0QZQ0 153 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 KRIT1O00522 736 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 FGGP02679 453 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 IGFBP6P24592 240 aaPredicted RBP13.36□□□□□ -0.27
NELFE-209ENST00000488426 PCSK1P29120 753 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 PBX3P40426 434 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 ACADSBP45954 432 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 RPL34P49207 117 aaKnown RBP13.36□□□□□ -0.27
NELFE-209ENST00000488426 SLC8A3P57103 927 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 RNASE9P60153 205 aaKnown RBP13.36□□□□□ -0.27
NELFE-209ENST00000488426 ZNF211Q13398 564 aaPredicted RBP13.36□□□□□ -0.27
NELFE-209ENST00000488426 ACAP1Q15027 740 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 BRD3Q15059 726 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 LONRF2Q1L5Z9 754 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 LRRC38Q5VT99 294 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 C8orf74Q6P047 294 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 PMF1Q6P1K2 205 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 METTL23Q86XA0 190 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 SLC2A14Q8TDB8 520 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 ADAMTS19Q8TE59 1207 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 METTL5Q9NRN9 209 aaKnown RBP13.36□□□□□ -0.27
NELFE-209ENST00000488426 GOLGA6L10A0A0M3HER8 536 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 CCDC151A5D8V7 595 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 HOXA2O43364 376 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 RB1P06400 928 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 PYGMP11217 842 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 ADORA2BP29275 332 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 RFC1P35251 1148 aaPredicted RBP13.36□□□□□ -0.27
NELFE-209ENST00000488426 SCNN1AP37088 669 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 OGDHQ02218 1023 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 FAM102AQ5T9C2 384 aaPredicted RBP13.36□□□□□ -0.27
NELFE-209ENST00000488426 CD300LGQ6UXG3 332 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 KATNAL2Q8IYT4 538 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 FUKQ8N0W3 1084 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 SUSD3Q96L08 255 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 HSFY1Q96LI6 401 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 CASD1Q96PB1 797 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 PNKPQ96T60 521 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 SYT15Q9BQS2 421 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 CWH43Q9H720 699 aa13.36□□□□□ -0.27
NELFE-209ENST00000488426 XPO1O14980 1071 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms