RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 JAKMIP2Q96AA8 810 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 MSANTD3Q96H12 275 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 SMOQ99835 787 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 DNAI2Q9GZS0 605 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 EBF3Q9H4W6 596 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 METTL14Q9HCE5 456 aaKnown RBP25.15■■□□□ 1.62
RNF38-208ENST00000488058 PATJQ8NI35 1801 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 ZNF840PA6NDX5 716 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 FAM200BP0CF97 657 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 CTHP32929 405 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 MAGEA9P43362 315 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 PPP3CCP48454 512 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 SLC5A3P53794 718 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 PAK1Q13153 545 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 SCAMP5Q8TAC9 235 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 SH3RF2Q8TEC5 729 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 WHAMMQ8TF30 809 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 TATDN2Q93075 761 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 SLC35C1Q96A29 364 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 CLDN23Q96B33 292 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 CYFIP2Q96F07 1278 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 ARID3AQ99856 593 aa25.14■■□□□ 1.62
RNF38-208ENST00000488058 LAMTOR5O43504 91 aa25.13■■□□□ 1.61
RNF38-208ENST00000488058 BEST1O76090 585 aa25.13■■□□□ 1.61
RNF38-208ENST00000488058 USP4Q13107 963 aa25.13■■□□□ 1.61
RNF38-208ENST00000488058 ZNF77Q15935 545 aa25.13■■□□□ 1.61
RNF38-208ENST00000488058 FRMD5Q7Z6J6 570 aa25.13■■□□□ 1.61
RNF38-208ENST00000488058 RALGPS2Q86X27 583 aaPredicted RBP25.13■■□□□ 1.61
RNF38-208ENST00000488058 PDZD8Q8NEN9 1154 aa25.13■■□□□ 1.61
RNF38-208ENST00000488058 ZMIZ2Q8NF64 920 aa25.13■■□□□ 1.61
RNF38-208ENST00000488058 FAM83CQ9BQN1 747 aa25.13■■□□□ 1.61
RNF38-208ENST00000488058 LMAN1LQ9HAT1 526 aa25.13■■□□□ 1.61
RNF38-208ENST00000488058 KIAA1468Q9P260 1216 aa25.13■■□□□ 1.61
RNF38-208ENST00000488058 ARSAP15289 507 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 IFNAR2P48551 515 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 MLLT6P55198 1093 aaPredicted RBP25.12■■□□□ 1.61
RNF38-208ENST00000488058 LRMPQ12912 555 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 FZD5Q13467 585 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 RUNX3Q13761 415 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 C1orf228Q6PIY5 440 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 TXNDC11Q6PKC3 985 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 TRIML1Q8N9V2 468 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 HEXIM2Q96MH2 286 aaKnown RBP25.12■■□□□ 1.61
RNF38-208ENST00000488058 HNRNPABQ99729 332 aaKnown RBP25.12■■□□□ 1.61
RNF38-208ENST00000488058 HPS4Q9NQG7 708 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 CISHQ9NSE2 258 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 DUS2Q9NX74 493 aaKnown RBP25.12■■□□□ 1.61
RNF38-208ENST00000488058 CHORDC1Q9UHD1 332 aaPredicted RBP25.12■■□□□ 1.61
RNF38-208ENST00000488058 ARHGAP26Q9UNA1 814 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 WNT6Q9Y6F9 365 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 MYO16Q9Y6X6 1858 aa25.12■■□□□ 1.61
RNF38-208ENST00000488058 TNFRSF10BO14763 440 aa25.11■■□□□ 1.61
RNF38-208ENST00000488058 PFKLP17858 780 aa25.11■■□□□ 1.61
RNF38-208ENST00000488058 RPS9P46781 194 aaKnown RBP25.11■■□□□ 1.61
RNF38-208ENST00000488058 FMO5P49326 533 aa25.11■■□□□ 1.61
RNF38-208ENST00000488058 PON2Q15165 354 aa25.11■■□□□ 1.61
RNF38-208ENST00000488058 RNF38Q9H0F5 515 aa25.11■■□□□ 1.61
RNF38-208ENST00000488058 SMPD4Q9NXE4 827 aa25.11■■□□□ 1.61
RNF38-208ENST00000488058 COQ4Q9Y3A0 265 aa25.11■■□□□ 1.61
RNF38-208ENST00000488058 MBL2P11226 248 aaPredicted RBP25.1■■□□□ 1.61
RNF38-208ENST00000488058 PDGFRLQ15198 375 aa25.1■■□□□ 1.61
RNF38-208ENST00000488058 CLEC20AQ6ZU45 233 aa25.1■■□□□ 1.61
RNF38-208ENST00000488058 ZNF687Q8N1G0 1237 aa25.1■■□□□ 1.61
RNF38-208ENST00000488058 TTC39CQ8N584 583 aa25.1■■□□□ 1.61
RNF38-208ENST00000488058 OVCA2Q8WZ82 227 aa25.1■■□□□ 1.61
RNF38-208ENST00000488058 FAXDC2Q96IV6 333 aa25.1■■□□□ 1.61
RNF38-208ENST00000488058 SRRTQ9BXP5 876 aaKnown RBP25.1■■□□□ 1.61
RNF38-208ENST00000488058 CSNK1G1Q9HCP0 422 aa25.1■■□□□ 1.61
RNF38-208ENST00000488058 GMIPQ9P107 970 aa25.1■■□□□ 1.61
RNF38-208ENST00000488058 CPQQ9Y646 472 aa25.1■■□□□ 1.61
RNF38-208ENST00000488058 LEFTY2O00292 366 aa25.09■■□□□ 1.61
RNF38-208ENST00000488058 OAS1P00973 400 aaKnown RBP25.09■■□□□ 1.61
RNF38-208ENST00000488058 SP9P0CG40 484 aa25.09■■□□□ 1.61
RNF38-208ENST00000488058 NBL1P41271 181 aa25.09■■□□□ 1.61
RNF38-208ENST00000488058 MTAPQ13126 283 aa25.09■■□□□ 1.61
RNF38-208ENST00000488058 LRRC32Q14392 662 aa25.09■■□□□ 1.61
RNF38-208ENST00000488058 PPP1R26Q5T8A7 1209 aaPredicted RBP25.09■■□□□ 1.61
RNF38-208ENST00000488058 OSCP1Q8WVF1 389 aa25.09■■□□□ 1.61
RNF38-208ENST00000488058 TMEM176AQ96HP8 235 aa25.09■■□□□ 1.61
RNF38-208ENST00000488058 CHRDQ9H2X0 955 aa25.09■■□□□ 1.61
RNF38-208ENST00000488058 RBM12Q9NTZ6 932 aaKnown RBP25.09■■□□□ 1.61
RNF38-208ENST00000488058 COMMD8Q9NX08 183 aa25.09■■□□□ 1.61
RNF38-208ENST00000488058 F5P12259 2224 aa25.08■■□□□ 1.61
RNF38-208ENST00000488058 CHRNB1P11230 501 aa25.08■■□□□ 1.61
RNF38-208ENST00000488058 SLC7A9P82251 487 aa25.08■■□□□ 1.61
RNF38-208ENST00000488058 CSTF1Q05048 431 aaKnown RBP25.08■■□□□ 1.61
RNF38-208ENST00000488058 CUL2Q13617 745 aa25.08■■□□□ 1.61
RNF38-208ENST00000488058 FOXR2Q6PJQ5 311 aa25.08■■□□□ 1.61
RNF38-208ENST00000488058 GPRIN1Q7Z2K8 1008 aa25.08■■□□□ 1.61
RNF38-208ENST00000488058 MAML2Q8IZL2 1156 aaPredicted RBP25.08■■□□□ 1.61
RNF38-208ENST00000488058 CPA6Q8N4T0 437 aa25.08■■□□□ 1.61
RNF38-208ENST00000488058 FBXO44Q9H4M3 255 aa25.08■■□□□ 1.61
RNF38-208ENST00000488058 R4GN57 208 aa25.08■■□□□ 1.61
RNF38-208ENST00000488058 OTOL1A6NHN0 477 aaPredicted RBP25.07■■□□□ 1.6
RNF38-208ENST00000488058 GNA14O95837 355 aa25.07■■□□□ 1.6
RNF38-208ENST00000488058 ACO1P21399 889 aaKnown RBP25.07■■□□□ 1.6
RNF38-208ENST00000488058 RAD23BP54727 409 aa25.07■■□□□ 1.6
RNF38-208ENST00000488058 ZXDBP98169 803 aa25.07■■□□□ 1.6
RNF38-208ENST00000488058 HECTD3Q5T447 861 aa25.07■■□□□ 1.6
RNF38-208ENST00000488058 CREBRFQ8IUR6 639 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms