RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	ZXDA	P98168	799 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	TYRO3	Q06418	890 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	KCNJ12	Q14500	433 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	KLHL40	Q2TBA0	621 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	HSP90AA4P	Q58FG1	418 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	GPR158	Q5T848	1215 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	GBP6	Q6ZN66	633 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	DENND5B	Q6ZUT9	1274 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	FAM35A	Q86V20	835 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	TMC8	Q8IU68	726 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	C12orf29	Q8N999	325 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	SHKBP1	Q8TBC3	707 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	SLC2A14	Q8TDB8	520 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	MRPS31	Q92665	395 aa	Known RBP	10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	EDA	Q92838	391 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	TRMT2B	Q96GJ1	504 aa	Known RBP	10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	TMEM176A	Q96HP8	235 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	C8orf48	Q96LL4	319 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	FAM81B	Q96LP2	452 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	MED15	Q96RN5	788 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	TUBGCP2	Q9BSJ2	902 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	C1QTNF1	Q9BXJ1	281 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	LRRC3	Q9BY71	257 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	ZNF518B	Q9C0D4	1074 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	INTS2	Q9H0H0	1204 aa	Known RBP	10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	EPHX3	Q9H6B9	360 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	ZFP14	Q9HCL3	533 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	ZNF334	Q9HCZ1	680 aa	Predicted RBP	10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	DMAP1	Q9NPF5	467 aa	Predicted RBP	10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	FAM49B	Q9NUQ9	324 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	GCNT4	Q9P109	453 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	HMGXB4	Q9UGU5	601 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	ZMYM5	Q9UJ78	669 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	NUMBL	Q9Y6R0	609 aa		10.1	□□□□□ -0.79
PTBP3-208	ENST00000487997	MIA3	Q5JRA6	1907 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	ANHX	E9PGG2	379 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	NOL4	O94818	638 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	RTN3	O95197	1032 aa	Predicted RBP	10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	FAM200B	P0CF97	657 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	HMGA1	P17096	107 aa	Known RBP	10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	CDK11B	P21127	795 aa	Known RBP	10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	DDX6	P26196	483 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	ADORA2B	P29275	332 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	MYL5	Q02045	173 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	IFRD2	Q12894	506 aa	Predicted RBP	10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	HTR4	Q13639	388 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	EXOC3L4	Q17RC7	722 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	VWA3B	Q502W6	1294 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	TCP11X2	Q5H9J9	407 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	PARM1	Q6UWI2	310 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	GAREM2	Q75VX8	874 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	IRF2BP1	Q8IU81	584 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	FUK	Q8N0W3	1084 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	NUP93	Q8N1F7	819 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	SLC44A3	Q8N4M1	653 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	STKLD1	Q8NE28	680 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	RSAD2	Q8WXG1	361 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	SMARCD2	Q92925	531 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	E2F7	Q96AV8	911 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	ELSPBP1	Q96BH3	223 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	MYRFL	Q96LU7	910 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	SLITRK1	Q96PX8	696 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	HNRNPAB	Q99729	332 aa	Known RBP	10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	ARID3A	Q99856	593 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	CRACR2A	Q9BSW2	395 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	NDST4	Q9H3R1	872 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	TASP1	Q9H6P5	420 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	KRT82	Q9NSB4	513 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	SAMSN1	Q9NSI8	373 aa	Known RBP	10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	FBXL21	Q9UKT6	434 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	KIAA1257	Q9ULG3	409 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	PCDHB4	Q9Y5E5	795 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	BDP1	A6H8Y1	2624 aa		10.09	□□□□□ -0.79
PTBP3-208	ENST00000487997	TTC28	Q96AY4	2481 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	GTPBP10	A4D1E9	387 aa	Known RBP	10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	SMTNL1	A8MU46	457 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	MOSPD3	O75425	235 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	ECI2	O75521	394 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	ABL1	P00519	1130 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	CD19	P15391	556 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	YWHAQ	P27348	245 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	AVPR1A	P37288	418 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	PPP3CC	P48454	512 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	PDE6C	P51160	858 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	RAD23B	P54727	409 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	MFAP3	P55082	362 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	MAP3K7CL	P57077	242 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	CYP4F8	P98187	520 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	GCNT1	Q02742	428 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	SIGLEC14	Q08ET2	396 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	ANO6	Q4KMQ2	910 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	SGO2	Q562F6	1265 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	FAM78A	Q5JUQ0	283 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	TMEM31	Q5JXX7	168 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	TMEM270	Q6UE05	265 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	RRAGA	Q7L523	313 aa		10.08	□□□□□ -0.8
PTBP3-208	ENST00000487997	ENOSF1	Q7L5Y1	443 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms