RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 KRT7P08729 469 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 RALAP11233 206 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 MIPP30301 263 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 CHRNA3P32297 505 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 PTPN9P43378 593 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 GATMP50440 423 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 CACNA2D1P54289 1103 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 SLC8A3P57103 927 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 COPS2P61201 443 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 ADCY1Q08828 1119 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 CCDC14Q49A88 953 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 TTC27Q6P3X3 843 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 NPAS4Q8IUM7 802 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 ABI1Q8IZP0 508 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 SEC14L1Q92503 715 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 MYLPFQ96A32 169 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 SMARCD1Q96GM5 515 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 MED10Q9BTT4 135 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 OSBPL8Q9BZF1 889 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 LRRC19Q9H756 370 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 NRDE2Q9H7Z3 1164 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 CSNK1G1Q9HCP0 422 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 KLHL11Q9NVR0 708 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 PCYOX1Q9UHG3 505 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 MTUS1Q9ULD2 1270 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 ATP11BQ9Y2G3 1177 aa9.91□□□□□ -0.82
SF3B1-211ENST00000487698 MYO16Q9Y6X6 1858 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 HHLA1C9JL84 531 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 RNF8O76064 485 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 OAZ2O95190 189 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 LCP1P13796 627 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 OR1G1P47890 313 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 ADIGQ0VDE8 80 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 DHX34Q14147 1143 aaKnown RBP9.9□□□□□ -0.82
SF3B1-211ENST00000487698 TAZQ16635 292 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 HADHQ16836 314 aaKnown RBP9.9□□□□□ -0.82
SF3B1-211ENST00000487698 C15orf59Q2T9L4 293 aaPredicted RBP9.9□□□□□ -0.82
SF3B1-211ENST00000487698 RAB6CQ53S08 254 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 RAB41Q5JT25 222 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 SH3PXD2AQ5TCZ1 1133 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 MFSD7Q6UXD7 560 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 SPOCD1Q6ZMY3 1216 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 MAATS1Q7Z4T9 603 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 CCDC50Q8IVM0 306 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 IFT20Q8IY31 132 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 CCDC26Q8TAB7 109 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 AENQ8WTP8 325 aaKnown RBP9.9□□□□□ -0.82
SF3B1-211ENST00000487698 MAIP1Q8WWC4 291 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 RAPGEF5Q92565 580 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 CFAP57Q96MR6 1250 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 FAM193BQ96PV7 902 aaPredicted RBP9.9□□□□□ -0.82
SF3B1-211ENST00000487698 PEBP4Q96S96 227 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 MRPL9Q9BYD2 267 aaKnown RBP9.9□□□□□ -0.82
SF3B1-211ENST00000487698 UBXN6Q9BZV1 441 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 RAB6CQ9H0N0 254 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 TMLHEQ9NVH6 421 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 LRFN2Q9ULH4 789 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 PRG3Q9Y2Y8 225 aaPredicted RBP9.9□□□□□ -0.82
SF3B1-211ENST00000487698 PTPRSQ13332 1948 aa9.9□□□□□ -0.82
SF3B1-211ENST00000487698 hCG_1818297A0A087WSY0 165 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 ESYT3A0FGR9 886 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 PI4K2BG5E9Z4 385 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 TTI1O43156 1089 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 AP1G2O75843 785 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 TRUB2O95900 331 aaKnown RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 CLTBP09497 229 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 SDC4P31431 198 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 RFC2P35250 354 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 CDKN2BP42772 138 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 PTGIRP43119 386 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 FNTAP49354 379 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 MAP3K7CLP57077 242 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 MRPS5P82675 430 aaKnown RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 GUCY2DQ02846 1103 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 YWHAHQ04917 246 aaPredicted RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 LRRC26Q2I0M4 334 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 EFHC1Q5JVL4 640 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 CNKSR3Q6P9H4 555 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 DEFB128Q7Z7B8 93 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 LRRTM3Q86VH5 581 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 THEM5Q8N1Q8 247 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 EIF1ADQ8N9N8 165 aaKnown RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 CMASQ8NFW8 434 aaPredicted RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 CASKIN2Q8WXE0 1202 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 CENPIQ92674 756 aaPredicted RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 SLCO2A1Q92959 643 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 RNF25Q96BH1 459 aaPredicted RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 ACSF2Q96CM8 615 aaPredicted RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 TMEM209Q96SK2 561 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 HINFPQ9BQA5 517 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 ADAM33Q9BZ11 813 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 C11orf49Q9H6J7 331 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 EPB41L5Q9HCM4 733 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 MARCH5Q9NX47 278 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 HCSTQ9UBK5 93 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 ADAM28Q9UKQ2 775 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 USP18Q9UMW8 372 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 ALPK3Q96L96 1907 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 PLXNA3P51805 1871 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 LRRD1A4D1F6 860 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms