RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 UCHL3P15374 230 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 GJA1P17302 382 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 SP100P23497 879 aaPredicted RBP12.33□□□□□ -0.44
CLIP2-207ENST00000487447 ADORA2BP29275 332 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 MRE11P49959 708 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 MAP3K7CLP57077 242 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 NHLH1Q02575 133 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 RAB41Q5JT25 222 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 FKBP15Q5T1M5 1219 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 LUZP1Q86V48 1076 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 FAM71AQ8IYT1 594 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 FGF14Q92915 247 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 SMARCD2Q92925 531 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 ELSPBP1Q96BH3 223 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 MCRS1Q96EZ8 462 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 ZSWIM3Q96MP5 696 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 GCNAQ96QF7 691 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 ATXN3LQ9H3M9 355 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 TASP1Q9H6P5 420 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 KCNK12Q9HB15 430 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
CLIP2-207ENST00000487447 SORCS3Q9UPU3 1222 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 FHOD1Q9Y613 1164 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 USP3Q9Y6I4 520 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 XPO1O14980 1071 aaKnown RBP12.32□□□□□ -0.44
CLIP2-207ENST00000487447 SETSIPP0DME0 302 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 CDK11BP21127 795 aaKnown RBP12.32□□□□□ -0.44
CLIP2-207ENST00000487447 YWHAQP27348 245 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 PLA2G4AP47712 749 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 RPL34P49207 117 aaKnown RBP12.32□□□□□ -0.44
CLIP2-207ENST00000487447 BCAT1P54687 386 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 CYP4F8P98187 520 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 BST2Q10589 180 aaKnown RBP12.32□□□□□ -0.44
CLIP2-207ENST00000487447 SYCP1Q15431 976 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 TAF12Q16514 161 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 GOLGA7BQ2TAP0 167 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 ARHGAP15Q53QZ3 475 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 FAM78AQ5JUQ0 283 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 STXBP5Q5T5C0 1151 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 PARM1Q6UWI2 310 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 GPRIN1Q7Z2K8 1008 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 MON1AQ86VX9 555 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 PDZD8Q8NEN9 1154 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 ZSCAN18Q8TBC5 510 aaPredicted RBP12.32□□□□□ -0.44
CLIP2-207ENST00000487447 KCTD13Q8WZ19 329 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 EDAQ92838 391 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 LSM14BQ9BX40 385 aaKnown RBP12.32□□□□□ -0.44
CLIP2-207ENST00000487447 SLC46A2Q9BY10 475 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 STK33Q9BYT3 514 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 FBXO44Q9H4M3 255 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 OBP2AQ9NY56 170 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 LIMD1Q9UGP4 676 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 MAGED2Q9UNF1 606 aaPredicted RBP12.32□□□□□ -0.44
CLIP2-207ENST00000487447 NUMBLQ9Y6R0 609 aa12.32□□□□□ -0.44
CLIP2-207ENST00000487447 A0A1W2PQC6 194 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 ZNF840PA6NDX5 716 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 F8VZ95 297 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 FOXN3O00409 490 aaPredicted RBP12.31□□□□□ -0.44
CLIP2-207ENST00000487447 EPHB6O15197 1021 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 OAS1P00973 400 aaKnown RBP12.31□□□□□ -0.44
CLIP2-207ENST00000487447 CD19P15391 556 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 TCF3P15923 654 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 BRD2P25440 801 aaKnown RBP12.31□□□□□ -0.44
CLIP2-207ENST00000487447 CLCN1P35523 988 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 KLK7P49862 253 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 TUBP50607 506 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 KIF11P52732 1056 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 JAM2P57087 298 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 PDE4CQ08493 712 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 TAF10Q12962 218 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 TDGQ13569 410 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 ZNF268Q14587 947 aaPredicted RBP12.31□□□□□ -0.44
CLIP2-207ENST00000487447 ARHGAP44Q17R89 818 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 GPR158Q5T848 1215 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 CCDC186Q7Z3E2 898 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 PIGZQ86VD9 579 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 UBALD2Q8IYN6 164 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 SCML4Q8N228 414 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 SLC44A3Q8N4M1 653 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 ZNF276Q8N554 614 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 SCAMP5Q8TAC9 235 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 SLC35F5Q8WV83 523 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 MRPS31Q92665 395 aaKnown RBP12.31□□□□□ -0.44
CLIP2-207ENST00000487447 E2F7Q96AV8 911 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 SLITRK1Q96PX8 696 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 HESX1Q9UBX0 185 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 DUSP12Q9UNI6 340 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 SCML2Q9UQR0 700 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 COL4A3Q01955 1670 aa12.31□□□□□ -0.44
CLIP2-207ENST00000487447 TULP2O00295 520 aa12.3□□□□□ -0.44
CLIP2-207ENST00000487447 PES1O00541 588 aaKnown RBP12.3□□□□□ -0.44
CLIP2-207ENST00000487447 PRAMEF12O95522 483 aa12.3□□□□□ -0.44
CLIP2-207ENST00000487447 ASGR2P07307 311 aa12.3□□□□□ -0.44
CLIP2-207ENST00000487447 KRT5P13647 590 aa12.3□□□□□ -0.44
CLIP2-207ENST00000487447 GNA15P30679 374 aa12.3□□□□□ -0.44
CLIP2-207ENST00000487447 TPM4P67936 248 aa12.3□□□□□ -0.44
CLIP2-207ENST00000487447 UBXN1Q04323 297 aa12.3□□□□□ -0.44
CLIP2-207ENST00000487447 DRAP1Q14919 205 aaPredicted RBP12.3□□□□□ -0.44
CLIP2-207ENST00000487447 NR1I3Q14994 352 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms