RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 SWSAP1Q6NVH7 229 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 APOA5Q6Q788 366 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 OTOP3Q7RTS5 596 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 FRMD5Q7Z6J6 570 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 PLA2G4DQ86XP0 818 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 CCDC103Q8IW40 242 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 GPR65Q8IYL9 337 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 ADSSL1Q8N142 457 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 VPS52Q8N1B4 723 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 LZTR1Q8N653 840 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 LENG9Q96B70 501 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 TMEM169Q96HH4 297 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 IGSF21Q96ID5 467 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 CEP89Q96ST8 783 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 MAP7D2Q96T17 732 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 LSG1Q9H089 658 aaKnown RBP5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 ZMYND12Q9H0C1 365 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 EPN3Q9H201 632 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 ZCCHC4Q9H5U6 513 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 SFXN1Q9H9B4 322 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 WNT16Q9UBV4 365 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 CDH22Q9UJ99 828 aa5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 KMT2BQ9UMN6 2715 aaPredicted RBP5.72□□□□□ -1.49
R3HDM1-218ENST00000487294 TPRP12270 2363 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 hCG_1642624A0A1W2PR95 340 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 SMCO2A6NFE2 343 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 SLC27A2O14975 620 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 INPPL1O15357 1258 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 ASGR2P07307 311 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 GALTP07902 379 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 SNRPB2P08579 225 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 EPCAMP16422 314 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 RXRAP19793 462 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 PI3P19957 117 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 PBX3P40426 434 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 ECI1P42126 302 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 GRIA2P42262 883 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 RAB27AP51159 221 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 CLCN3P51790 818 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 NAPAP54920 295 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 PRR5P85299 388 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 RAB33AQ14088 237 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 ANGPT1Q15389 498 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 PTPN14Q15678 1187 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 PRSS53Q2L4Q9 553 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 LETM2Q2VYF4 491 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 ZNF385BQ569K4 471 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 RARS2Q5T160 578 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 EFCAB12Q6NXP0 572 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 B3GNT9Q6UX72 402 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 CCDC149Q6ZUS6 474 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 TMEM173Q86WV6 379 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 TMEM151BQ8IW70 566 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 RNF168Q8IYW5 571 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 FBXL16Q8N461 479 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 METTL13Q8N6R0 699 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 RDM1Q8NG50 284 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 PLEKHO2Q8TD55 490 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 HDAC7Q8WUI4 952 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 RIT2Q99578 217 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 ZNF577Q9BSK1 485 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 APOL5Q9BWW9 433 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 VN1R3Q9BXE9 311 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 MFSD1Q9H3U5 465 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 SMOC2Q9H3U7 446 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 NRBP2Q9NSY0 501 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 TBC1D13Q9NVG8 400 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 DLL3Q9NYJ7 618 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.71□□□□□ -1.52e-7■■■■□ 20.4
R3HDM1-218ENST00000487294 EPS15L1Q9UBC2 864 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 DBR1Q9UK59 544 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 WDR81Q562E7 1941 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 CACNA1BQ00975 2339 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 ACACBO00763 2458 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 GPR179Q6PRD1 2367 aa5.71□□□□□ -1.5
R3HDM1-218ENST00000487294 FANCMQ8IYD8 2048 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 NID2Q14112 1375 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 A0A1W2PQU0 124 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 PI15O43692 258 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 EDIL3O43854 480 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 BUB1BO60566 1050 aaPredicted RBP5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 OFD1O75665 1012 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 STBD1O95210 358 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 LMNAP02545 664 aaKnown RBP5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 FUCA1P04066 466 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 CNPP09543 421 aaKnown RBP5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 SP100P23497 879 aaPredicted RBP5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 SFNP31947 248 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 METAP2P50579 478 aaKnown RBP eCLIP5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 CLCN4P51793 760 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 GFRA1P56159 465 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 PPP2R2AP63151 447 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 EXOSC10Q01780 885 aaKnown RBP5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 NONOQ15233 471 aaKnown RBP eCLIP5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 PFKFB3Q16875 520 aaPredicted RBP5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 NOMO2Q5JPE7 1267 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 TCERG1LQ5VWI1 586 aa5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 E4F1Q66K89 784 aaPredicted RBP5.7□□□□□ -1.5
R3HDM1-218ENST00000487294 CREB3L3Q68CJ9 461 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms