RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 FNBP1Q96RU3 617 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 PNKPQ96T60 521 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 PANK4Q9NVE7 773 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 CIZ1Q9ULV3 898 aaPredicted RBP20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 NME7Q9Y5B8 376 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 THADAQ6YHU6 1953 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 VPS37CA5D8V6 355 aaPredicted RBP20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 SLC9A3R1O14745 358 aaPredicted RBP20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 KIAA0391O15091 583 aaKnown RBP20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 KAT7O95251 611 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 OAS1P00973 400 aaKnown RBP20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 EIF2DP41214 584 aaKnown RBP20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 PPP3CCP48454 512 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 DUOXA2Q1HG44 320 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 HSF5Q4G112 596 aaPredicted RBP20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 MDH1BQ5I0G3 518 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 ARMCX6Q7L4S7 300 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 CBWD2Q8IUF1 395 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 FRMD1Q8N878 549 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 SPACA7Q96KW9 195 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 C8orf48Q96LL4 319 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 MMS19Q96T76 1030 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 MRPL45Q9BRJ2 306 aaKnown RBP20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 SCNM1Q9BWG6 230 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 POLMQ9NP87 494 aaPredicted RBP20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 CFAP97Q9P2B7 532 aa20.74■□□□□ 0.91
SMPDL3A-202ENST00000487215 PTPRDP23468 1912 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 ZNF233A6NK53 670 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 TNFRSF10BO14763 440 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 ABL1P00519 1130 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 APODP05090 189 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 PTGER3P43115 390 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 KIR2DL1P43626 348 aaPredicted RBP20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 CACNA2D1P54289 1103 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 LMAN2Q12907 356 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 TAF10Q12962 218 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 RESTQ13127 1097 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 SURF1Q15526 300 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 EMC10Q5UCC4 262 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 RHBDF2Q6PJF5 856 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 CCDC73Q6ZRK6 1079 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 TMEFF1Q8IYR6 380 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 GATA6Q92908 595 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 UPF2Q9HAU5 1272 aaKnown RBP20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 ZDHHC4Q9NPG8 344 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 ARHGEF4Q9NR80 690 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 TMEM74BQ9NUR3 256 aa20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 MBD1Q9UIS9 605 aaPredicted RBP20.73■□□□□ 0.91
SMPDL3A-202ENST00000487215 A0A087X0B3 334 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 MAP3K13O43283 966 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 ADH5P11766 374 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 STAT6P42226 847 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 MAPK8P45983 427 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 KDSRQ06136 332 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 MAP7D1Q3KQU3 841 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 EOGTQ5NDL2 527 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 HS2ST1Q7LGA3 356 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 TRAPPC11Q7Z392 1133 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 SYT12Q8IV01 421 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 WDR49Q8IV35 697 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 GLIS3Q8NEA6 775 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 NUSAP1Q9BXS6 441 aaKnown RBP20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 PANK2Q9BZ23 570 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 TMEM30AQ9NV96 361 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 BCCIPQ9P287 314 aaKnown RBP eCLIP20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 ASPMQ8IZT6 3477 aa20.72■□□□□ 0.91
SMPDL3A-202ENST00000487215 A0A0A0MRY4 1105 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 TMEM8BA6NDV4 472 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 ADAM23O75077 832 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 ADH1CP00326 375 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 MBL2P11226 248 aaPredicted RBP20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 ENGP17813 658 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 GNL1P36915 607 aaPredicted RBP20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 GRIA2P42262 883 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 TDRD10Q5VZ19 366 aaKnown RBP20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 KIAA1211LQ6NV74 962 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 FAM173BQ6P4H8 233 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 DDX42Q86XP3 938 aaKnown RBP eCLIP20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 HMGB4Q8WW32 186 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 SLITRK1Q96PX8 696 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 ZNF518BQ9C0D4 1074 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 SNX25Q9H3E2 840 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 HSPBP1Q9NZL4 362 aa20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 ATXN2Q99700 1313 aaKnown RBP20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 TNRC6BQ9UPQ9 1833 aaKnown RBP20.71■□□□□ 0.91
SMPDL3A-202ENST00000487215 TCRBV21S2A2A0A5A6 115 aa20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 TACC1O75410 805 aa20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 CST3P01034 146 aaPredicted RBP20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 CEBPZQ03701 1054 aaKnown RBP20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 IFRD2Q12894 506 aaPredicted RBP20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 LYSMD4Q5XG99 296 aa20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 CCDC65Q8IXS2 484 aa20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 PHTF2Q8N3S3 785 aa20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 OR6B3Q8NGW1 331 aa20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 HPS3Q969F9 1004 aa20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 ELOVL4Q9GZR5 314 aa20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 DPEP3Q9H4B8 488 aa20.7■□□□□ 0.9
SMPDL3A-202ENST00000487215 SPEGQ15772 3267 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms