RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ARCQ7LC44 396 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 CPNE8Q86YQ8 564 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 NPAS4Q8IUM7 802 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 IFT20Q8IY31 132 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 COLGALT2Q8IYK4 626 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 FUKQ8N0W3 1084 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 MYCBPAPQ8TBZ2 947 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 RXFP2Q8WXD0 754 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 KCTD13Q8WZ19 329 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 SMARCD1Q96GM5 515 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 SCLYQ96I15 445 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 PNKPQ96T60 521 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 PAAF1Q9BRP4 392 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 COLEC11Q9BWP8 271 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 AP1M1Q9BXS5 423 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 UBXN6Q9BZV1 441 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 RAB17Q9H0T7 212 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 C11orf49Q9H6J7 331 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 LRRC4Q9HBW1 653 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 CRTAC1Q9NQ79 661 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 HOMER3Q9NSC5 361 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 TMEM39AQ9NV64 488 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 TBC1D13Q9NVG8 400 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 TJP2Q9UDY2 1190 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 ATP11BQ9Y2G3 1177 aa7.4□□□□□ -1.22
SF3A3-206ENST00000487062 TIMM13Q9Y5L4 95 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-206ENST00000487062 TTC3P53804 2025 aa7.4□□□□□ -1.23
SF3A3-206ENST00000487062 PTPRDP23468 1912 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 NLRC5Q86WI3 1866 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 CARNS1A5YM72 827 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 FAM187AA6NFU0 413 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 C2CD4BA6NLJ0 364 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 TULP2O00295 520 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 PIK3R2O00459 728 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 SYN3O14994 580 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 PAPSS1O43252 624 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 RAD51CO43502 376 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 ATP8B1O43520 1251 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 PRPSAP2O60256 369 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 ATP2C2O75185 946 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 TADA2AO75478 443 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 DDHD2O94830 711 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 FBXO21O94952 628 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 HEXIM1O94992 359 aaKnown RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 KRT1P04264 644 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 ALDH2P05091 517 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 CLTBP09497 229 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 NDUFV2P19404 249 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 TNFRSF8P28908 595 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 CYP2C18P33260 490 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 PCK1P35558 622 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 PTPN9P43378 593 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 CTCFP49711 727 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 VSNL1P62760 191 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 OGDHQ02218 1023 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 YWHAHQ04917 246 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 ZNF252P-AS1Q0IIN9 211 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 ELAVL2Q12926 359 aaKnown RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 GPNMBQ14956 572 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 CYP1B1Q16678 543 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 INTS6LQ5JSJ4 861 aaKnown RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 CNKSR3Q6P9H4 555 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 OLFML1Q6UWY5 402 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 C4orf50Q6ZRC1 276 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 CLEC20AQ6ZU45 233 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 SLC26A9Q7LBE3 791 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 ADAT2Q7Z6V5 191 aaKnown RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 FAM35AQ86V20 835 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 PIGZQ86VD9 579 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 ZNF280BQ86YH2 543 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 DCP1BQ8IZD4 617 aaKnown RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 SIX6OS1Q8N1H7 587 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 EMC1Q8N766 993 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 DNAJC5GQ8N7S2 189 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 C12orf50Q8NA57 414 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 HASPINQ8TF76 798 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 ZDHHC16Q969W1 377 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 MAGOHBQ96A72 148 aaKnown RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 CASD1Q96PB1 797 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 LPIN3Q9BQK8 851 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 TMEM175Q9BSA9 504 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 B3GNT5Q9BYG0 378 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 OSBPL8Q9BZF1 889 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 DDX47Q9H0S4 455 aaKnown RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 ALG2Q9H553 416 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 KRT82Q9NSB4 513 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 FEZ2Q9UHY8 353 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 DMGDHQ9UI17 866 aaKnown RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 TBX21Q9UL17 535 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 FAN1Q9Y2M0 1017 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 UTP11Q9Y3A2 253 aaKnown RBP7.39□□□□□ -1.23
SF3A3-206ENST00000487062 TET1Q8NFU7 2136 aa7.39□□□□□ -1.23
SF3A3-206ENST00000487062 PATJQ8NI35 1801 aa7.38□□□□□ -1.23
SF3A3-206ENST00000487062 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.38□□□□□ -1.23
SF3A3-206ENST00000487062 MYBPHLA2RUH7 354 aa7.38□□□□□ -1.23
SF3A3-206ENST00000487062 TBKBP1A7MCY6 615 aa7.38□□□□□ -1.23
SF3A3-206ENST00000487062 I3L4J1 428 aa7.38□□□□□ -1.23
SF3A3-206ENST00000487062 CLDN5O00501 218 aa7.38□□□□□ -1.23
SF3A3-206ENST00000487062 NRP1O14786 923 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms