RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 PLAG1Q6DJT9 500 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 ARHGEF18Q6ZSZ5 1173 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 KIAA0408Q6ZU52 694 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 GPRIN1Q7Z2K8 1008 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 PPP1R32Q7Z5V6 425 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 KCTD20Q7Z5Y7 419 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 MOGAT1Q96PD6 335 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 LMF1Q96S06 567 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 SMOQ99835 787 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 NELFAQ9H3P2 528 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 ZHX3Q9H4I2 956 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 PGAP2Q9UHJ9 254 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 KIAA1210Q9ULL0 1709 aa4.66□□□□□ -1.66
PTCD3-216ENST00000487043 USP47Q96K76 1375 aa4.65□□□□□ -1.66
PTCD3-216ENST00000487043 TMEM2Q9UHN6 1383 aa4.65□□□□□ -1.66
PTCD3-216ENST00000487043 SETD1BQ9UPS6 1966 aaKnown RBP4.65□□□□□ -1.66
PTCD3-216ENST00000487043 MYO5BQ9ULV0 1848 aa4.65□□□□□ -1.66
PTCD3-216ENST00000487043 LAMC1P11047 1609 aa4.65□□□□□ -1.66
PTCD3-216ENST00000487043 PIK3C2GO75747 1445 aa4.65□□□□□ -1.66
PTCD3-216ENST00000487043 RIMS2Q9UQ26 1411 aa4.65□□□□□ -1.66
PTCD3-216ENST00000487043 RIMS1Q86UR5 1692 aaKnown RBP4.65□□□□□ -1.66
PTCD3-216ENST00000487043 DCLK1O15075 740 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 KCNQ3O43525 872 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 MFAP3LO75121 409 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 USP1O94782 785 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 ITGB3P05106 788 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 ITGA5P08648 1049 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 CYP2C9P11712 490 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 CKBP12277 381 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 FCER1AP12319 257 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 PECAM1P16284 738 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-216ENST00000487043 EGR1P18146 543 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 HK1P19367 917 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 TNFRSF1AP19438 455 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 ATICP31939 592 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 KRT17Q04695 432 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 SLFN5Q08AF3 891 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 TBX2Q13207 712 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-216ENST00000487043 BOP1Q14137 746 aaKnown RBP4.65□□□□□ -1.67
PTCD3-216ENST00000487043 KCNAB1Q14722 419 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 ELAVL1Q15717 326 aaKnown RBP4.65□□□□□ -1.67
PTCD3-216ENST00000487043 MAPKAPK3Q16644 382 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 INSCQ1MX18 579 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.65□□□□□ -1.67
PTCD3-216ENST00000487043 TMTC4Q5T4D3 741 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 ARL6IP4Q66PJ3 421 aaKnown RBP4.65□□□□□ -1.67
PTCD3-216ENST00000487043 SPTY2D1Q68D10 685 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-216ENST00000487043 FCRL6Q6DN72 434 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 LIN54Q6MZP7 749 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 MFSD5Q6N075 450 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 KLHL17Q6TDP4 642 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 CLEC4GQ6UXB4 293 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 TAX1BP1Q86VP1 789 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 ZNF280BQ86YH2 543 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 GATAD2AQ86YP4 633 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 CCDC28AQ8IWP9 274 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 CFAP52Q8N1V2 620 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 MB21D1Q8N884 522 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 STT3BQ8TCJ2 826 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 SMCR8Q8TEV9 937 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-216ENST00000487043 NUP133Q8WUM0 1156 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 ST8SIA2Q92186 375 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 MARS2Q96GW9 593 aaKnown RBP4.65□□□□□ -1.67
PTCD3-216ENST00000487043 LOXL4Q96JB6 756 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 OR14A2Q96R54 314 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 TRIB1Q96RU8 372 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 MESP1Q9BRJ9 268 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 KATNAL1Q9BW62 490 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 PLA2G12BQ9BX93 195 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 VPS45Q9NRW7 570 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 ETAA1Q9NY74 926 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 MAP3K20Q9NYL2 800 aaKnown RBP4.65□□□□□ -1.67
PTCD3-216ENST00000487043 CLCA2Q9UQC9 943 aa4.65□□□□□ -1.67
PTCD3-216ENST00000487043 PTPRMP28827 1452 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 UBR1Q8IWV7 1749 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 HMX3A6NHT5 357 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 FCHO1O14526 889 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 CCP110O43303 1012 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 EPB41L2O43491 1005 aaKnown RBP4.64□□□□□ -1.67
PTCD3-216ENST00000487043 COQ9O75208 318 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 PIAS2O75928 621 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 RASAL1O95294 804 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 GYS1P13807 737 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 TNFAIP3P21580 790 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 CNTFP26441 200 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 MGAT1P26572 445 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 LILRA4P59901 499 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 PPP2CBP62714 309 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 PPP2CAP67775 309 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 PIGFQ07326 219 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 ZNF844Q08AG5 666 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 TCF15Q12870 199 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 CNGB1Q14028 1251 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-216ENST00000487043 NPY5RQ15761 445 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 MGAT5BQ3V5L5 792 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 FAXCQ5TGI0 409 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 ANKRD45Q5TZF3 282 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 TAPT1Q6NXT6 567 aa4.64□□□□□ -1.67
PTCD3-216ENST00000487043 USP17L6PQ6QN14 398 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms