RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 DBX2Q6ZNG2 339 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 CCDC73Q6ZRK6 1079 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 FSIP1Q8NA03 581 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 TXNDC5Q8NBS9 432 aaKnown RBP9.08□□□□□ -0.96
APTX-228ENST00000486724 APPL2Q8NEU8 664 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 USP13Q92995 863 aaPredicted RBP9.08□□□□□ -0.96
APTX-228ENST00000486724 GJA10Q969M2 543 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 PGLYRP2Q96PD5 576 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 MTMR9Q96QG7 549 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 NCAPGQ9BPX3 1015 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 TMEM60Q9H2L4 133 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 CRISPLD1Q9H336 500 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 GOLPH3LQ9H4A5 285 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 GAREM1Q9H706 876 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 CPNE5Q9HCH3 593 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 TDP1Q9NUW8 608 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 DDX25Q9UHL0 483 aaKnown RBP9.08□□□□□ -0.96
APTX-228ENST00000486724 HPSEQ9Y251 543 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 FNDC3AQ9Y2H6 1198 aaKnown RBP9.08□□□□□ -0.96
APTX-228ENST00000486724 NUB1Q9Y5A7 615 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 AHCTF1Q8WYP5 2266 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 LRBAP50851 2863 aa9.08□□□□□ -0.96
APTX-228ENST00000486724 VWA3AA6NCI4 1184 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 SGK1O00141 431 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 PODXLO00592 558 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 N4BP3O15049 544 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 BRINP1O60477 761 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 VNN2O95498 520 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 KLF8O95600 359 aaPredicted RBP9.07□□□□□ -0.96
APTX-228ENST00000486724 AFPP02771 609 aaKnown RBP9.07□□□□□ -0.96
APTX-228ENST00000486724 PFKFB1P16118 471 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 LIG1P18858 919 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 LONP1P36776 959 aaKnown RBP9.07□□□□□ -0.96
APTX-228ENST00000486724 IFNAR2P48551 515 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 PSEN1P49768 467 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 FXR2P51116 673 aaKnown RBP eCLIP9.07□□□□□ -0.96
APTX-228ENST00000486724 GRIN1Q05586 938 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 NR1H3Q13133 447 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 MTF1Q14872 753 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 SUZ12Q15022 739 aaKnown RBP9.07□□□□□ -0.96
APTX-228ENST00000486724 IL17AQ16552 155 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 WDR45BQ5MNZ6 344 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 ICE2Q659A1 982 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 DTHD1Q6ZMT9 781 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 ERICH1Q86X53 443 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 FMR1NBQ8N0W7 255 aaPredicted RBP9.07□□□□□ -0.96
APTX-228ENST00000486724 IL17RCQ8NAC3 791 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 RNF214Q8ND24 703 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 ZNF248Q8NDW4 579 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 RIN3Q8TB24 985 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 OSCP1Q8WVF1 389 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 TSC1Q92574 1164 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 AK8Q96MA6 479 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 CLIC6Q96NY7 704 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 KCNMB3Q9NPA1 279 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 DDX19AQ9NUU7 478 aaKnown RBP9.07□□□□□ -0.96
APTX-228ENST00000486724 PRMT7Q9NVM4 692 aaPredicted RBP9.07□□□□□ -0.96
APTX-228ENST00000486724 DUS2Q9NX74 493 aaKnown RBP9.07□□□□□ -0.96
APTX-228ENST00000486724 SEPT3Q9UH03 358 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.07□□□□□ -0.96
APTX-228ENST00000486724 BTBD3Q9Y2F9 522 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 GDAQ9Y2T3 454 aa9.07□□□□□ -0.96
APTX-228ENST00000486724 ANK1P16157 1881 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 ITPR2Q14571 2701 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 IGHV1OR15-9A0A0B4J2B8 117 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 A0A1B0GTW7 788 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 A0A1B0GVL5 298 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 ANTXRLA6NF34 631 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 DDX6P26196 483 aaKnown RBP eCLIP9.06□□□□□ -0.96
APTX-228ENST00000486724 GRK6P43250 576 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 NDUFA8P51970 172 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 ZNF268Q14587 947 aaPredicted RBP9.06□□□□□ -0.96
APTX-228ENST00000486724 VEPH1Q14D04 833 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 TMEM132AQ24JP5 1023 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 TBC1D25Q3MII6 688 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 OTUD6AQ7L8S5 288 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 SLFN12Q8IYM2 578 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 MAB21L3Q8N8X9 362 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 IGSF22Q8N9C0 903 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 MNS1Q8NEH6 495 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 ETNPPLQ8TBG4 499 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 ASAP3Q8TDY4 903 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 SNRNP27Q8WVK2 155 aaKnown RBP9.06□□□□□ -0.96
APTX-228ENST00000486724 HAS1Q92839 578 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 FOXJ1Q92949 421 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 ZNF419Q96HQ0 510 aaPredicted RBP9.06□□□□□ -0.96
APTX-228ENST00000486724 SUSD3Q96L08 255 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 ADPGKQ9BRR6 497 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 OXCT2Q9BYC2 517 aaPredicted RBP9.06□□□□□ -0.96
APTX-228ENST00000486724 RAB34Q9BZG1 259 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 PDZD7Q9H5P4 517 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 TTC12Q9H892 705 aaPredicted RBP9.06□□□□□ -0.96
APTX-228ENST00000486724 IL21Q9HBE4 155 aa9.06□□□□□ -0.96
APTX-228ENST00000486724 ZNF638Q14966 1978 aaKnown RBP9.06□□□□□ -0.96
APTX-228ENST00000486724 KIF1CO43896 1103 aaKnown RBP9.05□□□□□ -0.96
APTX-228ENST00000486724 ZNF217O75362 1048 aa9.05□□□□□ -0.96
APTX-228ENST00000486724 TPM1P09493 284 aa9.05□□□□□ -0.96
APTX-228ENST00000486724 CDK4P11802 303 aa9.05□□□□□ -0.96
APTX-228ENST00000486724 MYF5P13349 255 aa9.05□□□□□ -0.96
APTX-228ENST00000486724 GUCY2CP25092 1073 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms