RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 GABBR2O75899 941 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 UNGP13051 313 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-229ENST00000486665 EPCAMP16422 314 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 NPR3P17342 541 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 CDH5P33151 784 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-229ENST00000486665 GRIK1P39086 918 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 MAGEA11P43364 429 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 NOMO3P69849 1222 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 CCZ1BP86790 482 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 CCZ1P86791 482 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-229ENST00000486665 ZXDAP98168 799 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 GFPT1Q06210 699 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-229ENST00000486665 DUSP6Q16828 381 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 DDR2Q16832 855 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 MGAT5BQ3V5L5 792 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 SDHAF4Q5VUM1 108 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 NAA35Q5VZE5 725 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 PMF1Q6P1K2 205 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 TRIM67Q6ZTA4 783 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 SCN4BQ8IWT1 228 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 C1orf131Q8NDD1 294 aaKnown RBP13.5□□□□□ -0.25
HDAC6-229ENST00000486665 SLC35F5Q8WV83 523 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 SMARCD1Q96GM5 515 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 CCDC42Q96M95 316 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 KCNF1Q9H3M0 494 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 CSNK1G1Q9HCP0 422 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 ABCB6Q9NP58 842 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 SPTLC3Q9NUV7 552 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 NENFQ9UMX5 172 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 ATP8B3O60423 1300 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 TMCO5BA8MYB1 307 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 HHLA1C9JL84 531 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 F8VP50 259 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 ZNF263O14978 683 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 AKR1B10O60218 316 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 GLUD1P00367 558 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 ELF1P32519 619 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 RGS7P49802 495 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 KIF11P52732 1056 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 BCAT1P54687 386 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 BST2Q10589 180 aaKnown RBP13.49□□□□□ -0.25
HDAC6-229ENST00000486665 KCNC3Q14003 757 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 VSTM1Q6UX27 236 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 TRIM72Q6ZMU5 477 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 TCEAL8Q8IYN2 117 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 TMEM35BQ8NCS4 154 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 KREMEN2Q8NCW0 462 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 GPR152Q8TDT2 470 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 SUSD6Q92537 303 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 RPGRIP1Q96KN7 1286 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 SEPT5Q99719 369 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-229ENST00000486665 APOL5Q9BWW9 433 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 UBXN6Q9BZV1 441 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 KCNH6Q9H252 994 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 TJP2Q9UDY2 1190 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 FBXW11Q9UKB1 542 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 MAFFQ9ULX9 164 aa13.49□□□□□ -0.25
HDAC6-229ENST00000486665 EPN1Q9Y6I3 576 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-229ENST00000486665 PIK3R2O00459 728 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 TNFRSF10BO14763 440 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 XPO1O14980 1071 aaKnown RBP13.48□□□□□ -0.25
HDAC6-229ENST00000486665 LSM8O95777 96 aaKnown RBP13.48□□□□□ -0.25
HDAC6-229ENST00000486665 C1RP00736 705 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 SETSIPP0DME0 302 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 ANXA13P27216 316 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 TUFMP49411 452 aaKnown RBP13.48□□□□□ -0.25
HDAC6-229ENST00000486665 SLC18A3Q16572 532 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 CCDC122Q5T0U0 273 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 ACAD10Q6JQN1 1059 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 LLGL2Q6P1M3 1020 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 GPRIN1Q7Z2K8 1008 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 BMP8AQ7Z5Y6 402 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 PIGZQ86VD9 579 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 CCDC170Q8IYT3 715 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 STKLD1Q8NE28 680 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 GIPC2Q8TF65 315 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 PPP2R3CQ969Q6 453 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 PBXIP1Q96AQ6 731 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 C8orf48Q96LL4 319 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 PHF7Q9BWX1 381 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-229ENST00000486665 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 S1PR5Q9H228 398 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 DEF6Q9H4E7 631 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 DMAP1Q9NPF5 467 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-229ENST00000486665 HSFX1Q9UBD0 423 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 NAGPAQ9UK23 515 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 HCFC2Q9Y5Z7 792 aa13.48□□□□□ -0.25
HDAC6-229ENST00000486665 PRRG1O14668 218 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 FTLP02792 175 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-229ENST00000486665 GZMAP12544 262 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 ATF6P18850 670 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 SP100P23497 879 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-229ENST00000486665 PLA2G4AP47712 749 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 RPL34P49207 117 aaKnown RBP13.47□□□□□ -0.25
HDAC6-229ENST00000486665 VCPP55072 806 aaKnown RBP13.47□□□□□ -0.25
HDAC6-229ENST00000486665 CENPCQ03188 943 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 TWF1Q12792 350 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 TCF15Q12870 199 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 PTP4A2Q12974 167 aa13.47□□□□□ -0.25
HDAC6-229ENST00000486665 PDCLQ13371 301 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms