RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 KRT82Q9NSB4 513 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 ADAM22Q9P0K1 906 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 ARHGAP20Q9P2F6 1191 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 WDR35Q9P2L0 1181 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 HSFX1Q9UBD0 423 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 HMGXB4Q9UGU5 601 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 AFF4Q9UHB7 1163 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 NOCTQ9UK39 431 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 EPN1Q9Y6I3 576 aaPredicted RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 SCINQ9Y6U3 715 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 MYBPHLA2RUH7 354 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 TMEM221A6NGB7 291 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 M0R296 226 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 O00370 1275 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 CAPN9O14815 690 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 XPO1O14980 1071 aaKnown RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 TEX28O15482 410 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 XYLBO75191 536 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 FBXO21O94952 628 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 RTN3O95197 1032 aaPredicted RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 FTLP02792 175 aaPredicted RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 CNPP09543 421 aaKnown RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 H2AFZP0C0S5 128 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 RPL17P18621 184 aaKnown RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 MAGEA11P43364 429 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 NOP2P46087 812 aaKnown RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 GPC5P78333 572 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 ROR1Q01973 937 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 GFPT1Q06210 699 aaPredicted RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 IFRD2Q12894 506 aaPredicted RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 CLEC16AQ2KHT3 1053 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 PPM1LQ5SGD2 360 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 SCARA3Q6AZY7 606 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 DPY19L2P1Q6NXN4 242 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 FAM171BQ6P995 826 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 DCUN1D2Q6PH85 259 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 CD300LGQ6UXG3 332 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 RNF19BQ6ZMZ0 732 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 TOGARAM2Q6ZUX3 1019 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 H2AFVQ71UI9 128 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 RTL10Q7L3V2 364 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 TADA2BQ86TJ2 420 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 RNF168Q8IYW5 571 aaPredicted RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 ARHGAP18Q8N392 663 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 FBXL6Q8N531 539 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 C1orf131Q8NDD1 294 aaKnown RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 OR10T2Q8NGX3 314 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 STK32AQ8WU08 396 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 SLC20A1Q8WUM9 679 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 CPA5Q8WXQ8 436 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 AUTS2Q8WXX7 1259 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 SECISBP2LQ93073 1101 aaKnown RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 FAM149B1Q96BN6 582 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 ZNF653Q96CK0 615 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 C18orf8Q96DM3 657 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 VCPIP1Q96JH7 1222 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 CEP295NLQ96MC4 621 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 ZNF512Q96ME7 567 aaPredicted RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 SLITRK1Q96PX8 696 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 TWNKQ96RR1 684 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 CHP1Q99653 195 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 B3GNT5Q9BYG0 378 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 UBXN6Q9BZV1 441 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 PLEKHA4Q9H4M7 779 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 UBE2ZQ9H832 354 aaPredicted RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 RXFP1Q9HBX9 757 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 PNPLA8Q9NP80 782 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 CYLDQ9NQC7 956 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 SPTLC3Q9NUV7 552 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 PARVAQ9NVD7 372 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 CTTNBP2NLQ9P2B4 639 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 UXTQ9UBK9 157 aaPredicted RBP7.33□□□□□ -1.24
UBR4-214ENST00000486515 LCMT1Q9UIC8 334 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 NAGPAQ9UK23 515 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 IRAK3Q9Y616 596 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 MICAL3Q7RTP6 2002 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 TRIP11Q15643 1979 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 TET1Q8NFU7 2136 aa7.33□□□□□ -1.24
UBR4-214ENST00000486515 PLXNA3P51805 1871 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 ASPMQ8IZT6 3477 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 A0A087X0T9 212 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 MTMR11A4FU01 709 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 GRXCR2A6NFK2 248 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 C2orf71A6NGG8 1288 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 F8VP50 259 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 CLDN5O00501 218 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 GRM6O15303 877 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 NCK2O43639 380 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 FGF19O95750 216 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 C1RP00736 705 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 PLEKP08567 350 aaPredicted RBP7.32□□□□□ -1.24
UBR4-214ENST00000486515 FAM228BP0C875 321 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 CSH1P0DML2 217 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 CSH2P0DML3 217 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 HAPLN1P10915 354 aaPredicted RBP7.32□□□□□ -1.24
UBR4-214ENST00000486515 LCP1P13796 627 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 ABCB4P21439 1286 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 KCNA5P22460 613 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 IGFBP6P24592 240 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms