RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 KLF6Q99612 283 aaPredicted RBP18.34■□□□□ 0.53
TNXB-205ENST00000486148 C2orf40Q9H1Z8 148 aa18.34■□□□□ 0.53
TNXB-205ENST00000486148 CDT1Q9H211 546 aa18.34■□□□□ 0.53
TNXB-205ENST00000486148 FZD8Q9H461 694 aa18.34■□□□□ 0.53
TNXB-205ENST00000486148 GOLGA8RI6L899 631 aa18.34■□□□□ 0.53
TNXB-205ENST00000486148 EIF3EP60228 445 aaKnown RBP18.34■□□□□ 0.53
TNXB-205ENST00000486148 DCAKDQ8WVC6 231 aa18.34■□□□□ 0.53
TNXB-205ENST00000486148 FRMD8P1Q9BZ68 369 aaPredicted RBP18.34■□□□□ 0.53
TNXB-205ENST00000486148 ELOVL4Q9GZR5 314 aa18.34■□□□□ 0.53
TNXB-205ENST00000486148 SPATC1LQ9H0A9 340 aa18.34■□□□□ 0.53
TNXB-205ENST00000486148 TXLNGQ9NUQ3 528 aa18.34■□□□□ 0.53
TNXB-205ENST00000486148 XPO7Q9UIA9 1087 aaKnown RBP18.34■□□□□ 0.53
TNXB-205ENST00000486148 HAO1Q9UJM8 370 aa18.34■□□□□ 0.53
TNXB-205ENST00000486148 BRCA1P38398 1863 aaKnown RBP18.34■□□□□ 0.53
TNXB-205ENST00000486148 WDR91A4D1P6 747 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 IQCF3P0C7M6 154 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 GNAT1P11488 350 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 NEFHP12036 1026 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 VGLL4Q14135 290 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 RAB6CQ53S08 254 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 IGDCC3Q8IVU1 814 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 CMASQ8NFW8 434 aaPredicted RBP18.33■□□□□ 0.53
TNXB-205ENST00000486148 PEBP4Q96S96 227 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 CALN1Q9BXU9 219 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 PHACTR1Q9C0D0 580 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 RAB6CQ9H0N0 254 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 CYLDQ9NQC7 956 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 FETUBQ9UGM5 382 aa18.33■□□□□ 0.53
TNXB-205ENST00000486148 USP2O75604 605 aaPredicted RBP18.33■□□□□ 0.52
TNXB-205ENST00000486148 MICAL2O94851 1124 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 ZWINTO95229 277 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 TUBP50607 506 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 PAPOLAP51003 745 aaKnown RBP18.33■□□□□ 0.52
TNXB-205ENST00000486148 CLCN3P51790 818 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 BASP1P80723 227 aaKnown RBP18.33■□□□□ 0.52
TNXB-205ENST00000486148 MMRN1Q13201 1228 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 ZC3H12AQ5D1E8 599 aaKnown RBP18.33■□□□□ 0.52
TNXB-205ENST00000486148 SH3PXD2AQ5TCZ1 1133 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 NPNTQ6UXI9 565 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 PALM2Q8IXS6 379 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 ZNF276Q8N554 614 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 SSU72Q9NP77 194 aaKnown RBP18.33■□□□□ 0.52
TNXB-205ENST00000486148 PPME1Q9Y570 386 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 A0A0G2JMZ2 1700 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 LRRC37A2A6NM11 1700 aa18.33■□□□□ 0.52
TNXB-205ENST00000486148 APOC4-APOC2K7ER74 178 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 SOCS7O14512 581 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 LGR5O75473 907 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 TRUB2O95900 331 aaKnown RBP18.32■□□□□ 0.52
TNXB-205ENST00000486148 APOC2P02655 101 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 PGK2P07205 417 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 RBP3P10745 1247 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 ATP2A2P16615 1042 aaKnown RBP18.32■□□□□ 0.52
TNXB-205ENST00000486148 PTPN11Q06124 597 aaPredicted RBP18.32■□□□□ 0.52
TNXB-205ENST00000486148 TAF11Q15544 211 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 SYCP2LQ5T4T6 812 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 ARMC3Q5W041 872 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 TCP10LQ8TDR4 215 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 LRMDAQ9H2I8 198 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 RPF1Q9H9Y2 349 aaKnown RBP18.32■□□□□ 0.52
TNXB-205ENST00000486148 PAPOLBQ9NRJ5 636 aaKnown RBP18.32■□□□□ 0.52
TNXB-205ENST00000486148 SLC17A7Q9P2U7 560 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 USP18Q9UMW8 372 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 CHMP2BQ9UQN3 213 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 GPR25O00155 361 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 NOP56O00567 594 aaKnown RBP18.32■□□□□ 0.52
TNXB-205ENST00000486148 GAS2O43903 313 aaKnown RBP18.32■□□□□ 0.52
TNXB-205ENST00000486148 RTN3O95197 1032 aaPredicted RBP18.32■□□□□ 0.52
TNXB-205ENST00000486148 T-ENOLP0DO92 83 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 CCNG1P51959 295 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 MBTD1Q05BQ5 628 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 DPYSL3Q14195 570 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 KLHL38Q2WGJ6 581 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 SPATA18Q8TC71 538 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 PIDD1Q9HB75 910 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 WDR35Q9P2L0 1181 aa18.32■□□□□ 0.52
TNXB-205ENST00000486148 SPDYE5A6NIY4 337 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 LACTBL1A8MY62 500 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 PIK3R2O00459 728 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 CSDE1O75534 798 aaKnown RBP18.31■□□□□ 0.52
TNXB-205ENST00000486148 ITGB3P05106 788 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 TBC1D25Q3MII6 688 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 PLEKHG4Q58EX7 1191 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 PDIK1LQ8N165 341 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 MCRS1Q96EZ8 462 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 NAF1Q96HR8 494 aaKnown RBP18.31■□□□□ 0.52
TNXB-205ENST00000486148 TSC22D3Q99576 134 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 NPHS2Q9NP85 383 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 NUMBLQ9Y6R0 609 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 PTPRFP10586 1907 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 M0QYV0 167 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 CILPO75339 1184 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 DCTN3O75935 186 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 LUC7L3O95232 432 aaKnown RBP18.31■□□□□ 0.52
TNXB-205ENST00000486148 CELF3Q5SZQ8 465 aaKnown RBP18.31■□□□□ 0.52
TNXB-205ENST00000486148 JADE1Q6IE81 842 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 TRNP1Q6NT89 227 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 ZC3H18Q86VM9 953 aaKnown RBP18.31■□□□□ 0.52
TNXB-205ENST00000486148 MFN1Q8IWA4 741 aa18.31■□□□□ 0.52
TNXB-205ENST00000486148 BANPQ8N9N5 519 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms