RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 DUS2Q9NX74 493 aaKnown RBP19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 IL37Q9NZH6 218 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 HMGXB4Q9UGU5 601 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 CACNA1IQ9P0X4 2223 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 DMDP11532 3685 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 TICRRQ7Z2Z1 1910 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 TRDMT1O14717 391 aaKnown RBP19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 TNFRSF10BO14763 440 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 KINO60870 393 aaKnown RBP19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 AP1G2O75843 785 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 ABL1P00519 1130 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 TRIM21P19474 475 aaKnown RBP19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 CXCL12P48061 93 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 SLC7A9P82251 487 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 INCA1Q0VD86 236 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 IFRD2Q12894 506 aaPredicted RBP19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 ORC1Q13415 861 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 CCINQ13939 588 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 ZC3H3Q8IXZ2 948 aaKnown RBP19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 TTC16Q8NEE8 873 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 PDZD8Q8NEN9 1154 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 SLC2A14Q8TDB8 520 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 OVCA2Q8WZ82 227 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 FAXDC2Q96IV6 333 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 NIF3L1Q9GZT8 377 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 ECT2Q9H8V3 914 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 CSNK1G1Q9HCP0 422 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 CIZ1Q9ULV3 898 aaPredicted RBP19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 MIA3Q5JRA6 1907 aa19.53■□□□□ 0.72
PRPF40A-209ENST00000486100 OLFM2O95897 454 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 OAS1P00973 400 aaKnown RBP19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 TDGF1P13385 188 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 CCDC130P13994 396 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 IFNAR2P48551 515 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 PMS1P54277 932 aaKnown RBP19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 NRLP54845 237 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 ZXDBP98169 803 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 TMEM196Q5HYL7 178 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 CPA6Q8N4T0 437 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 C12orf29Q8N999 325 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 SCAMP5Q8TAC9 235 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 SEMA4DQ92854 862 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 ATP2A3Q93084 1043 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 FBXO32Q969P5 355 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 CHFRQ96EP1 664 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 TWNKQ96RR1 684 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 HNRNPABQ99729 332 aaKnown RBP19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 SMOQ99835 787 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 NT5C1AQ9BXI3 368 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 LINC00597Q9H2U6 94 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 KRT82Q9NSB4 513 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 RAB20Q9NX57 234 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 CHORDC1Q9UHD1 332 aaPredicted RBP19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 WNT6Q9Y6F9 365 aa19.52■□□□□ 0.72
PRPF40A-209ENST00000486100 LEFTY2O00292 366 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 SLC16A3O15427 465 aaKnown RBP19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 LILRB5O75023 590 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 GJA4P35212 333 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 MXI1P50539 228 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 SLC5A3P53794 718 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 LRRC63Q05C16 580 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 GRSF1Q12849 480 aaKnown RBP eCLIP19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 EML3Q32P44 896 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 SNX30Q5VWJ9 437 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 KIAA1958Q8N8K9 716 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 FBXL13Q8NEE6 735 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 ZMIZ2Q8NF64 920 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 WHAMMQ8TF30 809 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 FAM49BQ9NUQ9 324 aa19.51■□□□□ 0.71
PRPF40A-209ENST00000486100 FAM92AA1XBS5 289 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 GADD45BO75293 160 aaPredicted RBP19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 CILPO75339 1184 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 BEST1O76090 585 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 CD58P19256 250 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 GALK1P51570 392 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 MAP3K7CLP57077 242 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 SATB1Q01826 763 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 NR1H3Q13133 447 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 STIM1Q13586 685 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 ISM2Q6H9L7 571 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 Q6ZS52 159 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 SUMF1Q8NBK3 374 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 EXOC4Q96A65 974 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 CYFIP2Q96F07 1278 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 DHTKD1Q96HY7 919 aaPredicted RBP19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 DNAI2Q9GZS0 605 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 MAN1B1Q9UKM7 699 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 CPQQ9Y646 472 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 VPS13AQ96RL7 3174 aa19.5■□□□□ 0.71
PRPF40A-209ENST00000486100 DENND4CQ5VZ89 1909 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 TRIM49BA6NDI0 452 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 PSMA7O14818 248 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 PAPSS2O95340 614 aaPredicted RBP19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 ZDHHC11BP0C7U3 371 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 FAM200BP0CF97 657 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 ADORA2BP29275 332 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 PPP1R2P41236 205 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 HECTD3Q5T447 861 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 TCERG1LQ5VWI1 586 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 FSTL4Q6MZW2 842 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms