RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 LINC01565O15544 149 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 CYP26A1O43174 497 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 THAP12O43422 761 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 CLASP2O75122 1294 aaKnown RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 CILPO75339 1184 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 TACC1O75410 805 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 NOL4O94818 638 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 CYP11A1P05108 521 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 TPM1P09493 284 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 CNPP09543 421 aaKnown RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 CCDC130P13994 396 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 PTPN1P18031 435 aaKnown RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 PAX3P23760 479 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 BRD2P25440 801 aaKnown RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 PCSK1P29120 753 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 ELF1P32519 619 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 STAT1P42224 750 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 RAD23BP54727 409 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 ROR1Q01973 937 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 GCNT1Q02742 428 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 TFF2Q03403 129 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 ADCY1Q08828 1119 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 IFRD2Q12894 506 aaPredicted RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 UBAP2LQ14157 1087 aaKnown RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 SKIV2LQ15477 1246 aaKnown RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 MGAT5BQ3V5L5 792 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 TCEAL5Q5H9L2 206 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 TAF3Q5VWG9 929 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 PDXDC1Q6P996 788 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 SARM1Q6SZW1 724 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 LRRTM3Q86VH5 581 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 SPATA2LQ8IUW3 424 aaPredicted RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 SCN4BQ8IWT1 228 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 DCP1BQ8IZD4 617 aaKnown RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 MRPL43Q8N983 215 aaKnown RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 C12orf29Q8N999 325 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 ATAD1Q8NBU5 361 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 MAFAQ8NHW3 353 aaPredicted RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 PPP2R3CQ969Q6 453 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 MYLPFQ96A32 169 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 TMEM176AQ96HP8 235 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 TNIP3Q96KP6 325 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 SEPT5Q99719 369 aaPredicted RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 CLSTN3Q9BQT9 956 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 NUP58Q9BVL2 599 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 APOL5Q9BWW9 433 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 NT5C1AQ9BXI3 368 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 STK33Q9BYT3 514 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 RHOBTB2Q9BYZ6 727 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 LMAN2LQ9H0V9 348 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 PDCL3Q9H2J4 239 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 CYP4F11Q9HBI6 524 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 NGRNQ9NPE2 291 aaKnown RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 ACP6Q9NPH0 428 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 PLCB1Q9NQ66 1216 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 CYLDQ9NQC7 956 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.98□□□□□ -1.45
COPS3-208ENST00000486032 CHST7Q9NS84 486 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 SEPT11Q9NVA2 429 aaKnown RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 TMLHEQ9NVH6 421 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 MTRRQ9UBK8 725 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 STK39Q9UEW8 545 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 CDH22Q9UJ99 828 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 CDH9Q9ULB4 789 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 BARX2Q9UMQ3 279 aaPredicted RBP5.98□□□□□ -1.45
COPS3-208ENST00000486032 STXBP5LQ9Y2K9 1186 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.98□□□□□ -1.45
COPS3-208ENST00000486032 MYO7AQ13402 2215 aa5.98□□□□□ -1.45
COPS3-208ENST00000486032 TSC2P49815 1807 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 TMEM265A0A087WTH1 108 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 WDR27A2RRH5 827 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 MTMR11A4FU01 709 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 LRRC53A6NM62 1247 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 F8VZ95 297 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 PRRG1O14668 218 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 GABRDO14764 452 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 TGM5O43548 720 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 SOAT2O75908 522 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 OAZ2O95190 189 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 EFEMP2O95967 443 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 GLUD1P00367 558 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 SKILP12757 684 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 EPCAMP16422 314 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 ACO1P21399 889 aaKnown RBP5.97□□□□□ -1.45
COPS3-208ENST00000486032 BDNFP23560 247 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 GNA15P30679 374 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 CASP14P31944 242 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 KRT9P35527 623 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 SOX5P35711 763 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 PBX1P40424 430 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 GPR15P49685 360 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 NDUFV1P49821 464 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 MRE11P49959 708 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 ADKP55263 362 aaKnown RBP5.97□□□□□ -1.45
COPS3-208ENST00000486032 CREMQ03060 361 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 PTK2Q05397 1052 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 DLX2Q07687 328 aaPredicted RBP5.97□□□□□ -1.45
COPS3-208ENST00000486032 INCA1Q0VD86 236 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 DUSP4Q13115 394 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 MRPL58Q14197 206 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms