RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CBWD5Q5RIA9 395 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 ASCL5Q7RTU5 278 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 MAML2Q8IZL2 1156 aaPredicted RBP18.72■□□□□ 0.59
COL6A1-204ENST00000486023 CRYBG2Q8N1P7 616 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 NELFBQ8WX92 580 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 TATDN2Q93075 761 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 CYFIP2Q96F07 1278 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 DHTKD1Q96HY7 919 aaPredicted RBP18.72■□□□□ 0.59
COL6A1-204ENST00000486023 HEXIM2Q96MH2 286 aaKnown RBP18.72■□□□□ 0.59
COL6A1-204ENST00000486023 SMOQ99835 787 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 TTLL2Q9BWV7 592 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 RNF38Q9H0F5 515 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 CYP3A43Q9HB55 503 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 HPS4Q9NQG7 708 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 OTOL1A6NHN0 477 aaPredicted RBP18.71■□□□□ 0.59
COL6A1-204ENST00000486023 FAM200BP0CF97 657 aa18.71■□□□□ 0.59
COL6A1-204ENST00000486023 MBL2P11226 248 aaPredicted RBP18.71■□□□□ 0.59
COL6A1-204ENST00000486023 CHRNB1P11230 501 aa18.71■□□□□ 0.59
COL6A1-204ENST00000486023 MAGEA9P43362 315 aa18.71■□□□□ 0.59
COL6A1-204ENST00000486023 RPS9P46781 194 aaKnown RBP18.71■□□□□ 0.59
COL6A1-204ENST00000486023 PDE6CP51160 858 aa18.71■□□□□ 0.59
COL6A1-204ENST00000486023 SLC5A3P53794 718 aa18.71■□□□□ 0.59
COL6A1-204ENST00000486023 ENPEPQ07075 957 aa18.71■□□□□ 0.59
COL6A1-204ENST00000486023 ZNF268Q14587 947 aaPredicted RBP18.71■□□□□ 0.59
COL6A1-204ENST00000486023 ZNF687Q8N1G0 1237 aa18.71■□□□□ 0.59
COL6A1-204ENST00000486023 DNAI2Q9GZS0 605 aa18.71■□□□□ 0.59
COL6A1-204ENST00000486023 LINC00597Q9H2U6 94 aa18.71■□□□□ 0.59
COL6A1-204ENST00000486023 CPQQ9Y646 472 aa18.71■□□□□ 0.59
COL6A1-204ENST00000486023 PPP1R3GB7ZBB8 358 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 LEFTY2O00292 366 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 BMP6P22004 513 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 PPP3CCP48454 512 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 MLLT6P55198 1093 aaPredicted RBP18.7■□□□□ 0.58
COL6A1-204ENST00000486023 LRRC32Q14392 662 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 PDGFRLQ15198 375 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 ZNF77Q15935 545 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 CREBRFQ8IUR6 639 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 ELOA2Q8IYF1 753 aaPredicted RBP18.7■□□□□ 0.58
COL6A1-204ENST00000486023 WHAMMQ8TF30 809 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 OSCP1Q8WVF1 389 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 MSANTD3Q96H12 275 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 ARID3AQ99856 593 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 NACA2Q9H009 215 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 MYO15AQ9UKN7 3530 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 ARHGAP26Q9UNA1 814 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 TICRRQ7Z2Z1 1910 aa18.7■□□□□ 0.58
COL6A1-204ENST00000486023 CILPO75339 1184 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 UBE2HP62256 183 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 ZXDBP98169 803 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 INCA1Q0VD86 236 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 MORC3Q14149 939 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 C1orf228Q6PIY5 440 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 ZC3H14Q6PJT7 736 aaKnown RBP18.69■□□□□ 0.58
COL6A1-204ENST00000486023 Q6ZS52 159 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 CPA6Q8N4T0 437 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 ZMIZ2Q8NF64 920 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 HNRNPABQ99729 332 aaKnown RBP18.69■□□□□ 0.58
COL6A1-204ENST00000486023 DUSP9Q99956 384 aaKnown RBP18.69■□□□□ 0.58
COL6A1-204ENST00000486023 CHRDQ9H2X0 955 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 CISHQ9NSE2 258 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 GMIPQ9P107 970 aa18.69■□□□□ 0.58
COL6A1-204ENST00000486023 DMDP11532 3685 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 PRR23AA6NEV1 266 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 PROB1E7EW31 1015 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 TNFRSF10BO14763 440 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 PPP1R2P41236 205 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 GALK1P51570 392 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 HECTD3Q5T447 861 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 NAIF1Q69YI7 327 aaPredicted RBP18.68■□□□□ 0.58
COL6A1-204ENST00000486023 FILIP1Q7Z7B0 1213 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 PDZD8Q8NEN9 1154 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 ATRIPQ8WXE1 791 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 CCSER2Q9H7U1 834 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 ECT2Q9H8V3 914 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 METTL14Q9HCE5 456 aaKnown RBP18.68■□□□□ 0.58
COL6A1-204ENST00000486023 CFAP97Q9P2B7 532 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 FBXO4Q9UKT5 387 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 USP34Q70CQ2 3546 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 F5P12259 2224 aa18.68■□□□□ 0.58
COL6A1-204ENST00000486023 BICDL2A1A5D9 508 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 IRF1P10914 325 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 ACO1P21399 889 aaKnown RBP18.67■□□□□ 0.58
COL6A1-204ENST00000486023 GJA4P35212 333 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 CXCL12P48061 93 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 AMPD2Q01433 879 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 SATB1Q01826 763 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 GRSF1Q12849 480 aaKnown RBP eCLIP18.67■□□□□ 0.58
COL6A1-204ENST00000486023 USP4Q13107 963 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 NR1H3Q13133 447 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 GAS6Q14393 721 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 EML3Q32P44 896 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 DGKKQ5KSL6 1271 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 PPP1R26Q5T8A7 1209 aaPredicted RBP18.67■□□□□ 0.58
COL6A1-204ENST00000486023 CLEC20AQ6ZU45 233 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 GPRIN1Q7Z2K8 1008 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 ZC3H3Q8IXZ2 948 aaKnown RBP18.67■□□□□ 0.58
COL6A1-204ENST00000486023 ATP2A3Q93084 1043 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 SLC35C1Q96A29 364 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 CHFRQ96EP1 664 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 TMEM176AQ96HP8 235 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms