RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 OR8K1Q8NGG5 319 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 TAS1R2Q8TE23 839 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 ATOH1Q92858 354 aaPredicted RBP18.08■□□□□ 0.48
VIM-205ENST00000485947 TRMT2BQ96GJ1 504 aaKnown RBP18.08■□□□□ 0.48
VIM-205ENST00000485947 ZSWIM3Q96MP5 696 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 NT5C1BQ96P26 610 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 NAA15Q9BXJ9 866 aaKnown RBP18.08■□□□□ 0.48
VIM-205ENST00000485947 PLA2G2FQ9BZM2 168 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 ATXN3LQ9H3M9 355 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 BRD9Q9H8M2 597 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 ABHD10Q9NUJ1 306 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 FECHP22830 423 aa18.07■□□□□ 0.48
VIM-205ENST00000485947 FCHO2Q0JRZ9 810 aa18.07■□□□□ 0.48
VIM-205ENST00000485947 WDR44Q5JSH3 913 aa18.07■□□□□ 0.48
VIM-205ENST00000485947 SMYD5Q6GMV2 418 aa18.07■□□□□ 0.48
VIM-205ENST00000485947 ZNF852Q6ZMS4 543 aa18.07■□□□□ 0.48
VIM-205ENST00000485947 SPATA2LQ8IUW3 424 aaPredicted RBP18.07■□□□□ 0.48
VIM-205ENST00000485947 BAP1Q92560 729 aa18.07■□□□□ 0.48
VIM-205ENST00000485947 MYRFLQ96LU7 910 aa18.07■□□□□ 0.48
VIM-205ENST00000485947 IMPG2Q9BZV3 1241 aa18.07■□□□□ 0.48
VIM-205ENST00000485947 ZNF334Q9HCZ1 680 aaPredicted RBP18.07■□□□□ 0.48
VIM-205ENST00000485947 EHD2Q9NZN4 543 aa18.07■□□□□ 0.48
VIM-205ENST00000485947 DLGAP2Q9P1A6 1054 aa18.07■□□□□ 0.48
VIM-205ENST00000485947 ZNF263O14978 683 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 CHADO15335 359 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 VNN1O95497 513 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 CST3P01034 146 aaPredicted RBP18.06■□□□□ 0.48
VIM-205ENST00000485947 HNRNPH3P31942 346 aaKnown RBP18.06■□□□□ 0.48
VIM-205ENST00000485947 TNNC1P63316 161 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 NCOA4Q13772 614 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 VITQ6UXI7 678 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 ARID3BQ8IVW6 561 aaPredicted RBP18.06■□□□□ 0.48
VIM-205ENST00000485947 KBTBD7Q8WVZ9 684 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 TAF4BQ92750 862 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 SYN2Q92777 582 aaPredicted RBP18.06■□□□□ 0.48
VIM-205ENST00000485947 SEMA4DQ92854 862 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 SPAG5Q96R06 1193 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 MMS19Q96T76 1030 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 LPIN3Q9BQK8 851 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 SYT15Q9BQS2 421 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 IER2Q9BTL4 223 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 BCO2Q9BYV7 579 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 IL21Q9HBE4 155 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 TMLHEQ9NVH6 421 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 ZNHIT6Q9NWK9 470 aaKnown RBP18.06■□□□□ 0.48
VIM-205ENST00000485947 GTF3C4Q9UKN8 822 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 FHOD1Q9Y613 1164 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 CACNA1BQ00975 2339 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 GVINP1Q7Z2Y8 2422 aa18.06■□□□□ 0.48
VIM-205ENST00000485947 HEPACAM2A8MVW5 462 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 H0Y858 1186 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 RNF225M0QZC1 329 aaPredicted RBP18.05■□□□□ 0.48
VIM-205ENST00000485947 DPYSL4O14531 572 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 SOAT2O75908 522 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 HMGA1P17096 107 aaKnown RBP18.05■□□□□ 0.48
VIM-205ENST00000485947 GJA1P17302 382 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 GNL1P36915 607 aaPredicted RBP18.05■□□□□ 0.48
VIM-205ENST00000485947 NBL1P41271 181 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 RPS9P46781 194 aaKnown RBP18.05■□□□□ 0.48
VIM-205ENST00000485947 GOLGA8FQ08AF8 430 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 GOLGA8DPQ0D2H9 430 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 WDR72Q3MJ13 1102 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 ARHGAP29Q52LW3 1261 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 GPR158Q5T848 1215 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 RRAGAQ7L523 313 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 ENOSF1Q7L5Y1 443 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 OSTM1Q86WC4 334 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 YAF2Q8IY57 180 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 CLDN23Q96B33 292 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 FAXDC2Q96IV6 333 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 SPATA17Q96L03 361 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 PI4K2AQ9BTU6 479 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 STK33Q9BYT3 514 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 XYLT2Q9H1B5 865 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 SNX25Q9H3E2 840 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 KCNF1Q9H3M0 494 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 SEMA4AQ9H3S1 761 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 LTB4R2Q9NPC1 389 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 NLRC4Q9NPP4 1024 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 DNAJC12Q9UKB3 198 aa18.05■□□□□ 0.48
VIM-205ENST00000485947 LRRC53A6NM62 1247 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 P4HA1P13674 534 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 PFKLP17858 780 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 ACAT1P24752 427 aaKnown RBP18.04■□□□□ 0.48
VIM-205ENST00000485947 GDI1P31150 447 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 MFAP3P55082 362 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 JAM2P57087 298 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 CCZ1BP86790 482 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 CCZ1P86791 482 aaPredicted RBP18.04■□□□□ 0.48
VIM-205ENST00000485947 GCNT1Q02742 428 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 ANGPT1Q15389 498 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 MEA1Q16626 185 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 SGSM1Q2NKQ1 1148 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 CELF5Q8N6W0 485 aaKnown RBP18.04■□□□□ 0.48
VIM-205ENST00000485947 ST13P5Q8NFI4 369 aaPredicted RBP18.04■□□□□ 0.48
VIM-205ENST00000485947 MYCBPAPQ8TBZ2 947 aa18.04■□□□□ 0.48
VIM-205ENST00000485947 MRPS31Q92665 395 aaKnown RBP18.04■□□□□ 0.48
VIM-205ENST00000485947 BAG1Q99933 345 aaPredicted RBP18.04■□□□□ 0.48
VIM-205ENST00000485947 C8orf33Q9H7E9 229 aaPredicted RBP18.04■□□□□ 0.48
VIM-205ENST00000485947 KIF9Q9HAQ2 790 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms