RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 ZBTB44Q8NCP5 570 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 TRIM58Q8NG06 486 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 MDM1Q8TC05 714 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 EXOC4Q96A65 974 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 DHX58Q96C10 678 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 C8orf76Q96K31 380 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 FAM167AQ96KS9 214 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 ARHGAP39Q9C0H5 1083 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 NSRP1Q9H0G5 558 aaKnown RBP4.84□□□□□ -1.63
RTN4-213ENST00000485749 OR10A4Q9H209 315 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 POFUT1Q9H488 388 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 LIN28AQ9H9Z2 209 aaKnown RBP4.84□□□□□ -1.63
RTN4-213ENST00000485749 GCM1Q9NP62 436 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 RIC8BQ9NVN3 520 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.84□□□□□ -1.63
RTN4-213ENST00000485749 PPP1R14DQ9NXH3 145 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 AATFQ9NY61 560 aaKnown RBP eCLIP4.84□□□□□ -1.63
RTN4-213ENST00000485749 GGA3Q9NZ52 723 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 SPATA7Q9P0W8 599 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 ASH2LQ9UBL3 628 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 EXTL2Q9UBQ6 330 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 DPP7Q9UHL4 492 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 PRSS50Q9UI38 385 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 RPS6KA6Q9UK32 745 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 SSX2IPQ9Y2D8 614 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 SIK3Q9Y2K2 1263 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 DTNAQ9Y4J8 743 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 SLC4A4Q9Y6R1 1079 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 LRRIQ4A6NIV6 560 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 N4BP3O15049 544 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 PHGDHO43175 533 aaKnown RBP4.83□□□□□ -1.64
RTN4-213ENST00000485749 DAPK3O43293 454 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ZNF254O75437 659 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ENDOD1O94919 500 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ATP5BP06576 529 aaKnown RBP4.83□□□□□ -1.64
RTN4-213ENST00000485749 VIMP08670 466 aaKnown RBP4.83□□□□□ -1.64
RTN4-213ENST00000485749 CELA3BP08861 270 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 PDHBP11177 359 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 CYP2A6P11509 494 aaPredicted RBP4.83□□□□□ -1.64
RTN4-213ENST00000485749 ZNF24P17028 368 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 LGALS4P56470 323 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 SLC26A5P58743 744 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 HAND2P61296 217 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ROM1Q03395 351 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 GABPB1Q06547 395 aaPredicted RBP4.83□□□□□ -1.64
RTN4-213ENST00000485749 ADCY2Q08462 1091 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ZNF543Q08ER8 600 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 GRSF1Q12849 480 aaKnown RBP eCLIP4.83□□□□□ -1.64
RTN4-213ENST00000485749 BFSP1Q12934 665 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 TUSC3Q13454 348 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 SNAPC2Q13487 334 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 SNX1Q13596 522 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 FGL2Q14314 439 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 POSTNQ15063 836 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 STK11Q15831 433 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ALG11Q2TAA5 492 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 MAJINQ3KP22 176 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 CCDC40Q4G0X9 1142 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 TIGD5Q53EQ6 642 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 C1orf141Q5JVX7 400 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 FCRLBQ6BAA4 426 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 OTUD7BQ6GQQ9 843 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 RPUSD3Q6P087 351 aaKnown RBP4.83□□□□□ -1.64
RTN4-213ENST00000485749 WDR73Q6P4I2 378 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 IYDQ6PHW0 289 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 APOA5Q6Q788 366 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ZNF783Q6ZMS7 281 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 HOOK3Q86VS8 718 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 CEP97Q8IW35 865 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 SYTL1Q8IYJ3 562 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 TRMT2AQ8IZ69 625 aaKnown RBP4.83□□□□□ -1.64
RTN4-213ENST00000485749 LINC00469Q8N7U9 141 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 IL17RDQ8NFM7 739 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 TTLL11Q8NHH1 800 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ZFAND2BQ8WV99 257 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ASB15Q8WXK1 588 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ASB12Q8WXK4 309 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 LINC01599Q8WXQ3 324 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ANKS1AQ92625 1134 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 RABGGTAQ92696 567 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 ATP6V0A1Q93050 837 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 KIAA1191Q96A73 305 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 TUBGCP3Q96CW5 907 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 MAP6Q96JE9 813 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 C7orf26Q96N11 449 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 TMEM237Q96Q45 408 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 TUBGCP5Q96RT8 1024 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 FOXB1Q99853 325 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 HGH1Q9BTY7 390 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 MYL10Q9BUA6 226 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 BRD8Q9H0E9 1235 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 C1orf21Q9H246 121 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 PNNQ9H307 717 aaKnown RBP4.83□□□□□ -1.64
RTN4-213ENST00000485749 ACAD9Q9H845 621 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 SPON1Q9HCB6 807 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 TBC1D7Q9P0N9 293 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 SUCLA2Q9P2R7 463 aaPredicted RBP4.83□□□□□ -1.64
RTN4-213ENST00000485749 SCOCQ9UIL1 159 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 TELO2Q9Y4R8 837 aa4.83□□□□□ -1.64
RTN4-213ENST00000485749 CDY2AQ9Y6F7 541 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms