RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 OVCA2Q8WZ82 227 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 FAM122AQ96E09 287 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 NELL2Q99435 816 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 NACA2Q9H009 215 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 FAM124BQ9H5Z6 455 aaPredicted RBP13.24□□□□□ -0.29
PTCD1-205ENST00000485746 C8orf33Q9H7E9 229 aaPredicted RBP13.24□□□□□ -0.29
PTCD1-205ENST00000485746 TRPV5Q9NQA5 729 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 TMEM30AQ9NV96 361 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 HESX1Q9UBX0 185 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 NDRG2Q9UN36 371 aaKnown RBP13.24□□□□□ -0.29
PTCD1-205ENST00000485746 CCL26Q9Y258 94 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 PIAS3Q9Y6X2 628 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 NOTCH4Q99466 2003 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 NCANO14594 1321 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 PMM2O15305 246 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 GALR2O43603 387 aaPredicted RBP13.23□□□□□ -0.29
PTCD1-205ENST00000485746 BEST1O76090 585 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 MBL2P11226 248 aaPredicted RBP13.23□□□□□ -0.29
PTCD1-205ENST00000485746 PFKLP17858 780 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 ACO1P21399 889 aaKnown RBP13.23□□□□□ -0.29
PTCD1-205ENST00000485746 ERCC5P28715 1186 aaPredicted RBP13.23□□□□□ -0.29
PTCD1-205ENST00000485746 IFNAR2P48551 515 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 RAD23BP54727 409 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 ZNF268Q14587 947 aaPredicted RBP13.23□□□□□ -0.29
PTCD1-205ENST00000485746 TMEM270Q6UE05 265 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 RRAGAQ7L523 313 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 DTWD2Q8NBA8 298 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 PJA1Q8NG27 643 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 SH3RF2Q8TEC5 729 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 FAM3CQ92520 227 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 LRRC3BQ96PB8 259 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 SLC22A12Q96S37 553 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 DUSP16Q9BY84 665 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 INTS2Q9H0H0 1204 aaKnown RBP13.23□□□□□ -0.29
PTCD1-205ENST00000485746 IRF2BPLQ9H1B7 796 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 THAP9Q9H5L6 903 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 CSNK1G1Q9HCP0 422 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 LTB4R2Q9NPC1 389 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 TLR8Q9NR97 1041 aaKnown RBP13.23□□□□□ -0.29
PTCD1-205ENST00000485746 GMIPQ9P107 970 aa13.23□□□□□ -0.29
PTCD1-205ENST00000485746 ARIH1Q9Y4X5 557 aaPredicted RBP13.23□□□□□ -0.29
PTCD1-205ENST00000485746 TECTAO75443 2155 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 VDRP11473 427 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 KRT5P13647 590 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 PRKCSHP14314 528 aaPredicted RBP13.22□□□□□ -0.29
PTCD1-205ENST00000485746 GLULP15104 373 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 MTF1Q14872 753 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 GOLGA7BQ2TAP0 167 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 ITPRIPL2Q3MIP1 535 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 HSP90AA4PQ58FG1 418 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 CT47A1Q5JQC4 288 aaPredicted RBP13.22□□□□□ -0.29
PTCD1-205ENST00000485746 HECTD3Q5T447 861 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 GBP6Q6ZN66 633 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 CLEC20AQ6ZU45 233 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 ZMIZ2Q8NF64 920 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 PRSS33Q8NF86 280 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 ATOH1Q92858 354 aaPredicted RBP13.22□□□□□ -0.29
PTCD1-205ENST00000485746 MSANTD3Q96H12 275 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 UBE2TQ9NPD8 197 aaPredicted RBP13.22□□□□□ -0.29
PTCD1-205ENST00000485746 DUS2Q9NX74 493 aaKnown RBP13.22□□□□□ -0.29
PTCD1-205ENST00000485746 SMPD4Q9NXE4 827 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 GTSE1Q9NYZ3 720 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 GCNT4Q9P109 453 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 KIAA1257Q9ULG3 409 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 DOCK8Q8NF50 2099 aa13.22□□□□□ -0.29
PTCD1-205ENST00000485746 MUC3AQ02505 3323 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 H0Y858 1186 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 LEFTY2O00292 366 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 TNFRSF10BO14763 440 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 TPM2P07951 284 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 TARSP26639 723 aaKnown RBP13.21□□□□□ -0.29
PTCD1-205ENST00000485746 AMPD2Q01433 879 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 TNK2Q07912 1038 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 NR1H3Q13133 447 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 RUNX3Q13761 415 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 PDGFRLQ15198 375 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 CCDC183Q5T5S1 534 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 ARHGAP17Q68EM7 881 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 TRIM68Q6AZZ1 485 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 C1orf228Q6PIY5 440 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 DDX42Q86XP3 938 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTCD1-205ENST00000485746 ARHGEF19Q8IW93 802 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 CCDC105Q8IYK2 499 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 CPA6Q8N4T0 437 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 EXOC4Q96A65 974 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 CRACR2AQ9BSW2 395 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 DDX23Q9BUQ8 820 aaKnown RBP13.21□□□□□ -0.29
PTCD1-205ENST00000485746 OSBPL6Q9BZF3 934 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 EBF3Q9H4W6 596 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 SPATA6Q9NWH7 488 aaPredicted RBP13.21□□□□□ -0.29
PTCD1-205ENST00000485746 ARHGAP26Q9UNA1 814 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 MTF2Q9Y483 593 aaPredicted RBP13.21□□□□□ -0.29
PTCD1-205ENST00000485746 CPQQ9Y646 472 aa13.21□□□□□ -0.29
PTCD1-205ENST00000485746 SPECC1L-ADORA2AF8WAN1 911 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 PAEPP09466 180 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 ARSAP15289 507 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 USP8P40818 1118 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 SOX9P48436 509 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 BCAT1P54687 386 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 MFAP3P55082 362 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms