RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 GBP2P32456 591 aaPredicted RBP8.73□□□□□ -1.01
SF3A1-208ENST00000485618 SOX5P35711 763 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 ZNF132P52740 706 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 EPHA5P54756 1037 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 VCPP55072 806 aaKnown RBP8.73□□□□□ -1.01
SF3A1-208ENST00000485618 TCF15Q12870 199 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 ORC1Q13415 861 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 PTPN21Q16825 1174 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 GOLGA7BQ2TAP0 167 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 PPP1R26Q5T8A7 1209 aaPredicted RBP8.73□□□□□ -1.01
SF3A1-208ENST00000485618 SPECC1LQ69YQ0 1117 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 SARM1Q6SZW1 724 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 TRIM72Q6ZMU5 477 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 MTSS1LQ765P7 747 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 APTXQ7Z2E3 356 aaKnown RBP8.73□□□□□ -1.01
SF3A1-208ENST00000485618 SIX6OS1Q8N1H7 587 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 UBR7Q8N806 425 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 TMEM35BQ8NCS4 154 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 STK32AQ8WU08 396 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 ZNF606Q8WXB4 792 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 HSFY1Q96LI6 401 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 NAP1L5Q96NT1 182 aaPredicted RBP8.73□□□□□ -1.01
SF3A1-208ENST00000485618 TWNKQ96RR1 684 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 NAA15Q9BXJ9 866 aaKnown RBP8.73□□□□□ -1.01
SF3A1-208ENST00000485618 NACA2Q9H009 215 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 ATXN3LQ9H3M9 355 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 SYNCQ9H7C4 482 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 SIX2Q9NPC8 291 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 NLRC4Q9NPP4 1024 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 CYLDQ9NQC7 956 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 TLR8Q9NR97 1041 aaKnown RBP8.73□□□□□ -1.01
SF3A1-208ENST00000485618 FAM86C1Q9NVL1 165 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 TMEM51Q9NW97 253 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 DNMT3BQ9UBC3 853 aaKnown RBP8.73□□□□□ -1.01
SF3A1-208ENST00000485618 HMGXB4Q9UGU5 601 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 TSPAN16Q9UKR8 245 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 CDH7Q9ULB5 785 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 LUC7L2Q9Y383 392 aaKnown RBP8.73□□□□□ -1.01
SF3A1-208ENST00000485618 C5orf42Q9H799 3197 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 A0A1W2PQJ5 194 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 F8VZ95 297 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 M0QYV0 167 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 O00370 1275 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 DPYSL4O14531 572 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 TEX33O43247 280 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 HCRTO43612 131 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 GFRA3O60609 400 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 LSM8O95777 96 aaKnown RBP8.72□□□□□ -1.01
SF3A1-208ENST00000485618 ABL1P00519 1130 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 RALAP11233 206 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 GABRR2P28476 465 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 AVPR1AP37288 418 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 ZBED6P86452 979 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 GOLGA8FQ08AF8 430 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 GOLGA8DPQ0D2H9 430 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 SFMBT2Q5VUG0 894 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 GJB7Q6PEY0 223 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 PAQR9Q6ZVX9 377 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 GET4Q7L5D6 327 aaPredicted RBP8.72□□□□□ -1.01
SF3A1-208ENST00000485618 MON1AQ86VX9 555 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 ZDHHC14Q8IZN3 488 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 KCTD13Q8WZ19 329 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 ANP32BQ92688 251 aaKnown RBP8.72□□□□□ -1.01
SF3A1-208ENST00000485618 SYN2Q92777 582 aaPredicted RBP8.72□□□□□ -1.01
SF3A1-208ENST00000485618 KAT5Q92993 513 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 FBXO32Q969P5 355 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 ASIC4Q96FT7 647 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 LPIN3Q9BQK8 851 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 XPO4Q9C0E2 1151 aaKnown RBP8.72□□□□□ -1.01
SF3A1-208ENST00000485618 LHX5Q9H2C1 402 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 CRISPLD1Q9H336 500 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 POMKQ9H5K3 350 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 TASP1Q9H6P5 420 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 IGSF9Q9P2J2 1179 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 PCDHGC3Q9UN70 934 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.72□□□□□ -1.01
SF3A1-208ENST00000485618 SCML2Q9UQR0 700 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 FHOD1Q9Y613 1164 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 NCANO14594 1321 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 ITIH6Q6UXX5 1313 aa8.72□□□□□ -1.01
SF3A1-208ENST00000485618 WDFY4Q6ZS81 3184 aa8.71□□□□□ -1.01
SF3A1-208ENST00000485618 TRAV19A0A0A6YYK7 116 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 RNF225M0QZC1 329 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-208ENST00000485618 SOAT2O75908 522 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 GFPT2O94808 682 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 VNN2O95498 520 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 LAMP2P13473 410 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 CYP11B1P15538 503 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 DESP17661 470 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 ATF6P18850 670 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 BRD2P25440 801 aaKnown RBP8.71□□□□□ -1.02
SF3A1-208ENST00000485618 WEE1P30291 646 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 PLA2G4AP47712 749 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 SLC5A3P53794 718 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 JAM2P57087 298 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 CDR2Q01850 454 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 ARID5AQ03989 594 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 TAF10Q12962 218 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 ASIC2Q16515 512 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 HECTD3Q5T447 861 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms