RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 PHLDB3Q6NSJ2 640 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 POTEHQ6S545 545 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 TMEM270Q6UE05 265 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 CLEC20AQ6ZU45 233 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 RRAGAQ7L523 313 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 GPIHBP1Q8IV16 184 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 TTC16Q8NEE8 873 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 NELL2Q99435 816 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 SMOQ99835 787 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 TUBGCP2Q9BSJ2 902 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 KCNH6Q9H252 994 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 UBE2TQ9NPD8 197 aaPredicted RBP13.36□□□□□ -0.27
SDHB-207ENST00000485515 TLR8Q9NR97 1041 aaKnown RBP13.36□□□□□ -0.27
SDHB-207ENST00000485515 NFE2L3Q9Y4A8 694 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 TECTAO75443 2155 aa13.36□□□□□ -0.27
SDHB-207ENST00000485515 KRBA1A5PL33 1030 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 MAN2B1O00754 1011 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 NCAM2O15394 837 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 LETM1O95202 739 aaPredicted RBP13.35□□□□□ -0.27
SDHB-207ENST00000485515 PRAMEF12O95522 483 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 KRT5P13647 590 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 GLULP15104 373 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 ACO1P21399 889 aaKnown RBP13.35□□□□□ -0.27
SDHB-207ENST00000485515 AVPR2P30518 371 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 KPNA1P52294 538 aaPredicted RBP13.35□□□□□ -0.27
SDHB-207ENST00000485515 NUBP1P53384 320 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 STARD6P59095 220 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 AMPD2Q01433 879 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 STILQ15468 1287 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 VWA3BQ502W6 1294 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 HSP90AA4PQ58FG1 418 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 HECTD3Q5T447 861 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 ARHGAP17Q68EM7 881 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 ZNF852Q6ZMS4 543 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 TADA2BQ86TJ2 420 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 ARL14EPQ8N8R7 260 aaPredicted RBP13.35□□□□□ -0.27
SDHB-207ENST00000485515 ANKRD52Q8NB46 1076 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 SCAMP5Q8TAC9 235 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 LMO3Q8TAP4 145 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 USP13Q92995 863 aaPredicted RBP13.35□□□□□ -0.27
SDHB-207ENST00000485515 MSANTD3Q96H12 275 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 MED15Q96RN5 788 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 CYP2S1Q96SQ9 504 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 CRACR2AQ9BSW2 395 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 SMG9Q9H0W8 520 aaKnown RBP13.35□□□□□ -0.27
SDHB-207ENST00000485515 NDST4Q9H3R1 872 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 TBC1D17Q9HA65 648 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 TMEM30AQ9NV96 361 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 CHORDC1Q9UHD1 332 aaPredicted RBP13.35□□□□□ -0.27
SDHB-207ENST00000485515 SIT1Q9Y3P8 196 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 NCANO14594 1321 aa13.35□□□□□ -0.27
SDHB-207ENST00000485515 KANSL1LA0AUZ9 987 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 C2orf78A6NCI8 922 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 TNFRSF10BO14763 440 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 TADA3O75528 432 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 BEST1O76090 585 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 PDGFBP01127 241 aaPredicted RBP13.34□□□□□ -0.27
SDHB-207ENST00000485515 AOC1P19801 751 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 PSEN1P49768 467 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 TUBP50607 506 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 BCAT1P54687 386 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 TCP11X2Q5H9J9 407 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 CAVIN1Q6NZI2 390 aaKnown RBP13.34□□□□□ -0.27
SDHB-207ENST00000485515 TRIM65Q6PJ69 517 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 TPRG1Q6ZUI0 275 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 DDX42Q86XP3 938 aaKnown RBP eCLIP13.34□□□□□ -0.27
SDHB-207ENST00000485515 IRF2BP1Q8IU81 584 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 ZMIZ2Q8NF64 920 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 UBXN6Q9BZV1 441 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 C8orf33Q9H7E9 229 aaPredicted RBP13.34□□□□□ -0.27
SDHB-207ENST00000485515 HEBP1Q9NRV9 189 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 IL37Q9NZH6 218 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 APEX2Q9UBZ4 518 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 ARHGAP26Q9UNA1 814 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 PTPRDP23468 1912 aa13.34□□□□□ -0.27
SDHB-207ENST00000485515 MYH10P35580 1976 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 MED7O43513 233 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 MBL2P11226 248 aaPredicted RBP13.33□□□□□ -0.28
SDHB-207ENST00000485515 CDK11BP21127 795 aaKnown RBP13.33□□□□□ -0.28
SDHB-207ENST00000485515 MLLT6P55198 1093 aaPredicted RBP13.33□□□□□ -0.28
SDHB-207ENST00000485515 MYL5Q02045 173 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 GOLGA8FQ08AF8 430 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 GOLGA8DPQ0D2H9 430 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 BST2Q10589 180 aaKnown RBP13.33□□□□□ -0.28
SDHB-207ENST00000485515 MTF1Q14872 753 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 UBXN2BQ14CS0 331 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 PDGFRLQ15198 375 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 GOLGA7BQ2TAP0 167 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 SNX30Q5VWJ9 437 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 ARHGEF19Q8IW93 802 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 ARHGAP18Q8N392 663 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 RBBP8NLQ8NC74 664 aaPredicted RBP13.33□□□□□ -0.28
SDHB-207ENST00000485515 CDK5RAP1Q96SZ6 601 aaKnown RBP13.33□□□□□ -0.28
SDHB-207ENST00000485515 IRF2BPLQ9H1B7 796 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 LRRC4Q9HBW1 653 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 GKN1Q9NS71 199 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 SAMSN1Q9NSI8 373 aaKnown RBP13.33□□□□□ -0.28
SDHB-207ENST00000485515 TMEM63CQ9P1W3 806 aa13.33□□□□□ -0.28
SDHB-207ENST00000485515 TSPAN16Q9UKR8 245 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms