RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 CCDC163A0A0D9SF12 145 aa27.33■■□□□ 1.97
HLA-F-227ENST00000485513 MED19A0JLT2 244 aaPredicted RBP27.33■■□□□ 1.97
HLA-F-227ENST00000485513 LEFTY2O00292 366 aa27.33■■□□□ 1.97
HLA-F-227ENST00000485513 PDXKO00764 312 aa27.33■■□□□ 1.97
HLA-F-227ENST00000485513 NFATC1O95644 943 aa27.33■■□□□ 1.97
HLA-F-227ENST00000485513 NR3C1P04150 777 aa27.33■■□□□ 1.97
HLA-F-227ENST00000485513 RAP1GAPP47736 663 aa27.33■■□□□ 1.97
HLA-F-227ENST00000485513 KRT85P78386 507 aa27.33■■□□□ 1.97
HLA-F-227ENST00000485513 SLC7A9P82251 487 aa27.33■■□□□ 1.97
HLA-F-227ENST00000485513 IFRD2Q12894 506 aaPredicted RBP27.33■■□□□ 1.97
HLA-F-227ENST00000485513 SCARA5Q6ZMJ2 495 aa27.33■■□□□ 1.97
HLA-F-227ENST00000485513 RNF38Q9H0F5 515 aa27.33■■□□□ 1.97
HLA-F-227ENST00000485513 ATP8B3O60423 1300 aa27.33■■□□□ 1.97
HLA-F-227ENST00000485513 VNN1O95497 513 aa27.32■■□□□ 1.96
HLA-F-227ENST00000485513 NUP93Q8N1F7 819 aa27.32■■□□□ 1.96
HLA-F-227ENST00000485513 FAM160A2Q8N612 972 aaPredicted RBP27.32■■□□□ 1.96
HLA-F-227ENST00000485513 TNIP3Q96KP6 325 aa27.32■■□□□ 1.96
HLA-F-227ENST00000485513 CPQQ9Y646 472 aa27.32■■□□□ 1.96
HLA-F-227ENST00000485513 SPAG17Q6Q759 2223 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 OLFM2O95897 454 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 OAS1P00973 400 aaKnown RBP27.31■■□□□ 1.96
HLA-F-227ENST00000485513 RPN1P04843 607 aaKnown RBP27.31■■□□□ 1.96
HLA-F-227ENST00000485513 YWHAQP27348 245 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 ATXN1P54253 815 aaKnown RBP27.31■■□□□ 1.96
HLA-F-227ENST00000485513 DLG4P78352 724 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 CAMKK1Q8N5S9 505 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 RPLP0P6Q8NHW5 317 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 TMC2Q8TDI7 906 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 GAB3Q8WWW8 586 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 EZH1Q92800 747 aaPredicted RBP27.31■■□□□ 1.96
HLA-F-227ENST00000485513 ELMO3Q96BJ8 720 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 CHAMP1Q96JM3 812 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 MED10Q9BTT4 135 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 SDCBP2Q9H190 292 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 SEMA4GQ9NTN9 838 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 POLR3BQ9NW08 1133 aaPredicted RBP27.31■■□□□ 1.96
HLA-F-227ENST00000485513 SMPD4Q9NXE4 827 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 ZDHHC9Q9Y397 364 aa27.31■■□□□ 1.96
HLA-F-227ENST00000485513 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.31■■□□□ 1.96
HLA-F-227ENST00000485513 MYO16Q9Y6X6 1858 aa27.3■■□□□ 1.96
HLA-F-227ENST00000485513 RPP40O75818 363 aaKnown RBP27.3■■□□□ 1.96
HLA-F-227ENST00000485513 RTN3O95197 1032 aaPredicted RBP27.3■■□□□ 1.96
HLA-F-227ENST00000485513 P4HA1P13674 534 aa27.3■■□□□ 1.96
HLA-F-227ENST00000485513 SYKP43405 635 aa27.3■■□□□ 1.96
HLA-F-227ENST00000485513 ZACNQ401N2 412 aa27.3■■□□□ 1.96
HLA-F-227ENST00000485513 CEP135Q66GS9 1140 aa27.3■■□□□ 1.96
HLA-F-227ENST00000485513 FAM35AQ86V20 835 aa27.3■■□□□ 1.96
HLA-F-227ENST00000485513 KIAA1958Q8N8K9 716 aa27.3■■□□□ 1.96
HLA-F-227ENST00000485513 KCNK16Q96T55 309 aa27.3■■□□□ 1.96
HLA-F-227ENST00000485513 FRMD4BQ9Y2L6 1034 aa27.3■■□□□ 1.96
HLA-F-227ENST00000485513 SDK1Q7Z5N4 2213 aa27.29■■□□□ 1.96
HLA-F-227ENST00000485513 CALUO43852 315 aaPredicted RBP27.29■■□□□ 1.96
HLA-F-227ENST00000485513 CSRP2Q16527 193 aa27.29■■□□□ 1.96
HLA-F-227ENST00000485513 SGSM1Q2NKQ1 1148 aa27.29■■□□□ 1.96
HLA-F-227ENST00000485513 FILIP1Q7Z7B0 1213 aa27.29■■□□□ 1.96
HLA-F-227ENST00000485513 PDZD8Q8NEN9 1154 aa27.29■■□□□ 1.96
HLA-F-227ENST00000485513 FBXO32Q969P5 355 aa27.29■■□□□ 1.96
HLA-F-227ENST00000485513 CCDC47Q96A33 483 aaKnown RBP27.29■■□□□ 1.96
HLA-F-227ENST00000485513 ACDQ96AP0 544 aa27.29■■□□□ 1.96
HLA-F-227ENST00000485513 HHIPQ96QV1 700 aa27.29■■□□□ 1.96
HLA-F-227ENST00000485513 KIAA1549LQ6ZVL6 1849 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 SLC9A3R1O14745 358 aaPredicted RBP27.28■■□□□ 1.96
HLA-F-227ENST00000485513 KIF20AO95235 890 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 CCDC192P0DO97 292 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 NDUFA8P51970 172 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 PAQR9Q6ZVX9 377 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 SV2AQ7L0J3 742 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 SYT13Q7L8C5 426 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 CACNA2D4Q7Z3S7 1137 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 ACOT1Q86TX2 421 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 CCDC26Q8TAB7 109 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 OVCA2Q8WZ82 227 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 TAF4BQ92750 862 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 SMARCD1Q96GM5 515 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 RTKNQ9BST9 563 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 DMAP1Q9NPF5 467 aaPredicted RBP27.28■■□□□ 1.96
HLA-F-227ENST00000485513 CFAP97Q9P2B7 532 aa27.28■■□□□ 1.96
HLA-F-227ENST00000485513 FAM237AA0A1B0GTK4 181 aa27.27■■□□□ 1.96
HLA-F-227ENST00000485513 IKBKBO14920 756 aa27.27■■□□□ 1.96
HLA-F-227ENST00000485513 PRR29P0C7W0 189 aa27.27■■□□□ 1.96
HLA-F-227ENST00000485513 MBL2P11226 248 aaPredicted RBP27.27■■□□□ 1.96
HLA-F-227ENST00000485513 OPRD1P41143 372 aa27.27■■□□□ 1.96
HLA-F-227ENST00000485513 PRR23CQ6ZRP0 262 aa27.27■■□□□ 1.96
HLA-F-227ENST00000485513 DDX42Q86XP3 938 aaKnown RBP eCLIP27.27■■□□□ 1.96
HLA-F-227ENST00000485513 SCAMP5Q8TAC9 235 aa27.27■■□□□ 1.96
HLA-F-227ENST00000485513 TRAF3IP3Q9Y228 551 aa27.27■■□□□ 1.96
HLA-F-227ENST00000485513 EML5Q05BV3 1969 aa27.27■■□□□ 1.96
HLA-F-227ENST00000485513 NCOR2Q9Y618 2525 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 AXIN1O15169 862 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 AP1G2O75843 785 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 RHOBTB3O94955 611 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 CYP17A1P05093 508 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 SLC5A3P53794 718 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 DMC1Q14565 340 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 GAB4Q2WGN9 574 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 ADGRG2Q8IZP9 1017 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 FUKQ8N0W3 1084 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 NETO1Q8TDF5 533 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 KRT82Q9NSB4 513 aa27.26■■□□□ 1.95
HLA-F-227ENST00000485513 CHORDC1Q9UHD1 332 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms