RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 GRIK1P39086 918 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 RPL7AP62424 266 aaKnown RBP21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 SLC6A3Q01959 620 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 RAB41Q5JT25 222 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 RNF19BQ6ZMZ0 732 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 SCUBE3Q8IX30 993 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 ATAD1Q8NBU5 361 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 BTBD6Q96KE9 485 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 TRIM7Q9C029 511 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 GOLPH3Q9H4A6 298 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 PCDHA11Q9Y5I1 949 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 TMEM191CA6NGB0 347 aa21.51■■□□□ 1.03
VCPKMT-203ENST00000484763 TRIM66O15016 1216 aa21.51■■□□□ 1.03
VCPKMT-203ENST00000484763 FTCDO95954 541 aa21.51■■□□□ 1.03
VCPKMT-203ENST00000484763 CA3P07451 260 aa21.51■■□□□ 1.03
VCPKMT-203ENST00000484763 DNAJB2P25686 324 aa21.51■■□□□ 1.03
VCPKMT-203ENST00000484763 SCNN1AP37088 669 aa21.51■■□□□ 1.03
VCPKMT-203ENST00000484763 TKTL1P51854 596 aa21.51■■□□□ 1.03
VCPKMT-203ENST00000484763 MESDQ14696 234 aa21.51■■□□□ 1.03
VCPKMT-203ENST00000484763 PIWIL1Q96J94 861 aaKnown RBP21.51■■□□□ 1.03
VCPKMT-203ENST00000484763 C17orf80Q9BSJ5 609 aa21.51■■□□□ 1.03
VCPKMT-203ENST00000484763 C5orf67F2Z3F1 127 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 FBXO21O94952 628 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 GPRIN1Q7Z2K8 1008 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 SCN4BQ8IWT1 228 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 C8orf48Q96LL4 319 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 FNIP2Q9P278 1114 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 TMEM110-MUSTN1A8MSY1 372 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 H0YGN5 161 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 ENC1O14682 589 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 VNN2O95498 520 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 SLC26A9Q7LBE3 791 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 PEX26Q7Z412 305 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 JOSD2Q8TAC2 188 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 CLEC4CQ8WTT0 213 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 AUTS2Q8WXX7 1259 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 SAMD11Q96NU1 681 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 CNGB3Q9NQW8 809 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 IP6K2Q9UHH9 426 aa21.5■■□□□ 1.03
VCPKMT-203ENST00000484763 ARHGEF15O94989 841 aa21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 ATP1A1P05023 1023 aaKnown RBP21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 RB1P06400 928 aa21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 RFC1P35251 1148 aaPredicted RBP21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 UBE3AQ05086 875 aa21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 ADCY1Q08828 1119 aa21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 MEI1Q5TIA1 1274 aa21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 TPGS2Q68CL5 300 aa21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 ZNF461Q8TAF7 563 aa21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 FNIP1Q8TF40 1166 aa21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 C11orf84Q9BUA3 381 aaPredicted RBP21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 AFF4Q9UHB7 1163 aaKnown RBP21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 TMEM59LQ9UK28 342 aa21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 AMFRQ9UKV5 643 aa21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 ALG6Q9Y672 507 aa21.49■■□□□ 1.03
VCPKMT-203ENST00000484763 SART1O43290 800 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 LILRB3O75022 631 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 PROSCO94903 275 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 NDUFV1P49821 464 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 MRPS5P82675 430 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 MGAT5BQ3V5L5 792 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 EFHC1Q5JVL4 640 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 TMC7Q7Z402 723 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 NT5DC3Q86UY8 548 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 TTC9BQ8N6N2 239 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 SEPT5Q99719 369 aaPredicted RBP21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 ULBP1Q9BZM6 244 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 RXFP1Q9HBX9 757 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 ALG13Q9NP73 1137 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 MTUS1Q9ULD2 1270 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 ABLIM3O94929 683 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 HAPLN1P10915 354 aaPredicted RBP21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 MAN1A1P33908 653 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 CA8P35219 290 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 SLC1A1P43005 524 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 SLC5A3P53794 718 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 DUSP4Q13115 394 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 RAB33AQ14088 237 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 EMC1Q8N766 993 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 TGS1Q96RS0 853 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 CRISPLD1Q9H336 500 aa21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 YBX2Q9Y2T7 364 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-203ENST00000484763 MYO16Q9Y6X6 1858 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 TNFRSF10BO14763 440 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 NCK2O43639 380 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 GRAP2O75791 330 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 ZBED1O96006 694 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 COMTP21964 271 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 DAOAP59103 153 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 RNASE9P60153 205 aaKnown RBP21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 OGDHQ02218 1023 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 ZNF252P-AS1Q0IIN9 211 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 PIGHQ14442 188 aaPredicted RBP21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 PTPROQ16827 1216 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 DDR2Q16832 855 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 ARCQ7LC44 396 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 SPRED2Q7Z698 418 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 SCML4Q8N228 414 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms