RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 DPEP3Q9H4B8 488 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 PCDHGA5Q9Y5G8 931 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 LRRIQ3A6PVS8 624 aaPredicted RBP12.19□□□□□ -0.46
SCFD1-206ENST00000484733 AXIN1O15169 862 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 PHACTR2O75167 634 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 ZNF806P0C7X5 589 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 OPRD1P41143 372 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 CACNA2D1P54289 1103 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 TAF10Q12962 218 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 NAIF1Q69YI7 327 aaPredicted RBP12.19□□□□□ -0.46
SCFD1-206ENST00000484733 NUP93Q8N1F7 819 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 RPLP0P6Q8NHW5 317 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 TMC2Q8TDI7 906 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 SLITRK1Q96PX8 696 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 ZNF518BQ9C0D4 1074 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 TMEM30AQ9NV96 361 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 NXF1Q9UBU9 619 aaKnown RBP12.19□□□□□ -0.46
SCFD1-206ENST00000484733 EML5Q05BV3 1969 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 PDXKO00764 312 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 APBB3O95704 486 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 RPN1P04843 607 aaKnown RBP12.19□□□□□ -0.46
SCFD1-206ENST00000484733 YWHAQP27348 245 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 STK4Q13043 487 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 DMC1Q14565 340 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 ZNF667Q5HYK9 610 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 PLA2G2CQ5R387 149 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 KBTBD6Q86V97 674 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 ADGRG2Q8IZP9 1017 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 KIAA0895Q8NCT3 520 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 USP33Q8TEY7 942 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 TAF4BQ92750 862 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 TNIP3Q96KP6 325 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 KCTD10Q9H3F6 313 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 EXOC1Q9NV70 894 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 CPQQ9Y646 472 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 RALGAPA1Q6GYQ0 2036 aa12.19□□□□□ -0.46
SCFD1-206ENST00000484733 A0A0A0MRY4 1105 aa12.18□□□□□ -0.46
SCFD1-206ENST00000484733 VNN1O95497 513 aa12.18□□□□□ -0.46
SCFD1-206ENST00000484733 HSP90AA1P07900 732 aaKnown RBP12.18□□□□□ -0.46
SCFD1-206ENST00000484733 CCDC192P0DO97 292 aa12.18□□□□□ -0.46
SCFD1-206ENST00000484733 CMA1P23946 247 aa12.18□□□□□ -0.46
SCFD1-206ENST00000484733 EIF2DP41214 584 aaKnown RBP12.18□□□□□ -0.46
SCFD1-206ENST00000484733 DNM1Q05193 864 aaKnown RBP12.18□□□□□ -0.46
SCFD1-206ENST00000484733 NCOA4Q13772 614 aa12.18□□□□□ -0.46
SCFD1-206ENST00000484733 ZNF699Q32M78 642 aa12.18□□□□□ -0.46
SCFD1-206ENST00000484733 KMT5BQ4FZB7 885 aa12.18□□□□□ -0.46
SCFD1-206ENST00000484733 PAQR9Q6ZVX9 377 aa12.18□□□□□ -0.46
SCFD1-206ENST00000484733 GRAMD1CQ8IYS0 662 aa12.18□□□□□ -0.46
SCFD1-206ENST00000484733 HPSEQ9Y251 543 aa12.18□□□□□ -0.46
SCFD1-206ENST00000484733 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.17□□□□□ -0.46
SCFD1-206ENST00000484733 FAM92AA1XBS5 289 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 DCDC2BA2VCK2 349 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 K7EQS6 105 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 CLDN5O00501 218 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 TNFRSF10BO14763 440 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 MAPK13O15264 365 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 CYP17A1P05093 508 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 PXNP49023 591 aaPredicted RBP12.17□□□□□ -0.46
SCFD1-206ENST00000484733 CASP4P49662 377 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 TUBP50607 506 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 MRPS21P82921 87 aaKnown RBP12.17□□□□□ -0.46
SCFD1-206ENST00000484733 ENPEPQ07075 957 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 DHCR24Q15392 516 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 NFIL3Q16649 462 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 SGSM1Q2NKQ1 1148 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 PLK5Q496M5 336 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 FILIP1Q7Z7B0 1213 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 DDX1Q92499 740 aaKnown RBP12.17□□□□□ -0.46
SCFD1-206ENST00000484733 OTUB2Q96DC9 234 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 ARRDC1-AS1Q9H2J1 176 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 SMYD3Q9H7B4 428 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 TBC1D14Q9P2M4 693 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 DMXL1Q9Y485 3027 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 FAM237AA0A1B0GTK4 181 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 E2F8A0AVK6 867 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 IKBKBO14920 756 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 RHOBTB1O94844 696 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 ZDHHC11BP0C7U3 371 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 P4HA1P13674 534 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 CDH8P55286 799 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 BIRC3Q13489 604 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 FOXD4L6Q3SYB3 417 aaPredicted RBP12.17□□□□□ -0.46
SCFD1-206ENST00000484733 ZACNQ401N2 412 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 HSF5Q4G112 596 aaPredicted RBP12.17□□□□□ -0.46
SCFD1-206ENST00000484733 FOXD4L3Q6VB84 417 aaPredicted RBP12.17□□□□□ -0.46
SCFD1-206ENST00000484733 FAM35AQ86V20 835 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 C11orf74Q86VG3 221 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 UNC93AQ86WB7 457 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 CRYBG2Q8N1P7 616 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 HHIPQ96QV1 700 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 SDCBP2Q9H190 292 aa12.17□□□□□ -0.46
SCFD1-206ENST00000484733 DUSP15Q9H1R2 295 aaPredicted RBP12.17□□□□□ -0.46
SCFD1-206ENST00000484733 DMAP1Q9NPF5 467 aaPredicted RBP12.17□□□□□ -0.46
SCFD1-206ENST00000484733 POLR3BQ9NW08 1133 aaPredicted RBP12.17□□□□□ -0.46
SCFD1-206ENST00000484733 CEP250Q9BV73 2442 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 MBL2P11226 248 aaPredicted RBP12.16□□□□□ -0.46
SCFD1-206ENST00000484733 PKP1Q13835 747 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 RASSF3Q86WH2 238 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 FBXO32Q969P5 355 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 SMARCD1Q96GM5 515 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms