RNA–Protein interactions for RNA: ENST00000484594.5

ERBB4-209, Transcript of erb-b2 receptor tyrosine kinase 4, human

TSL 1 (best)

Gene ERBB4, Length 2,680 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB4-209	ENST00000484594	SLITRK6	Q9H5Y7	841 aa		11.44	□□□□□ -0.58
ERBB4-209	ENST00000484594	MARCH5	Q9NX47	278 aa		11.44	□□□□□ -0.58
ERBB4-209	ENST00000484594	EHD2	Q9NZN4	543 aa		11.44	□□□□□ -0.58
ERBB4-209	ENST00000484594	HTT	P42858	3142 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	TRIM43B	A6NCK2	446 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	C2CD4B	A6NLJ0	364 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	KCNK3	O14649	394 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	RNF8	O76064	485 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	GPD1	P21695	349 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	WDR5	P61964	334 aa	Known RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	FUT10	Q6P4F1	479 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	PAQR9	Q6ZVX9	377 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	C12orf29	Q8N999	325 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	CENPI	Q92674	756 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	PGAP3	Q96FM1	320 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	FAM129A	Q9BZQ8	928 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	CWH43	Q9H720	699 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	TBKBP1	A7MCY6	615 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594		E5RJQ4	531 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	ENDOD1	O94919	500 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	HTRA4	P83105	476 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	TTC31	Q49AM3	519 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	MDH1B	Q5I0G3	518 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	TEX35	Q5T0J7	233 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	PM20D1	Q6GTS8	502 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	PMF1	Q6P1K2	205 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	RTL10	Q7L3V2	364 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	ARHGAP18	Q8N392	663 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	ZNF276	Q8N554	614 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	C12orf50	Q8NA57	414 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	PIK3R5	Q8WYR1	880 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	PCED1B	Q96HM7	432 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	MCEE	Q96PE7	176 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	MTUS1	Q9ULD2	1270 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	PDGFRB	P09619	1106 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	TNFRSF8	P28908	595 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	SLC11A1	P49279	550 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	ALDH7A1	P49419	539 aa	Known RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	CYP1B1	Q16678	543 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	TCTN1	Q2MV58	587 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	FAM183BP	Q6ZVS7	135 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	BNIPL	Q7Z465	357 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	SRL	Q86TD4	932 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	SPATA4	Q8NEY3	305 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	NT5C3B	Q969T7	300 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	SPATA17	Q96L03	361 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	ZNF558	Q96NG5	402 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	SLC2A13	Q96QE2	648 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	PAAF1	Q9BRP4	392 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	DDX23	Q9BUQ8	820 aa	Known RBP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	FAM49B	Q9NUQ9	324 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	USP3	Q9Y6I4	520 aa		11.43	□□□□□ -0.58
ERBB4-209	ENST00000484594	ATMIN	O43313	823 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	CCDC130	P13994	396 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	BRCC3	P46736	316 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	BCAR1	P56945	870 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	FPGS	Q05932	587 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	TAZ	Q16635	292 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	USP41	Q3LFD5	358 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	FAM71B	Q8TC56	605 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	SP7	Q8TDD2	431 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	MYLPF	Q96A32	169 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	RNPC3	Q96LT9	517 aa	Known RBP	11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	MED10	Q9BTT4	135 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	LRRC4	Q9HBW1	653 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	METTL5	Q9NRN9	209 aa	Known RBP	11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	KRT82	Q9NSB4	513 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	IL37	Q9NZH6	218 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	STAP1	Q9ULZ2	295 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	NDC80	O14777	642 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	FSCN2	O14926	492 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	PPP1R12A	O14974	1030 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	MDM4	O15151	490 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	PAPSS1	O43252	624 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	PSMA2	P25787	234 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	TKT	P29401	623 aa	Known RBP	11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	GBP1	P32455	592 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	NOS2	P35228	1153 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	MRPS5	P82675	430 aa	Known RBP	11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	GPR17	Q13304	367 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	BOLA3	Q53S33	107 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	VARS2	Q5ST30	1063 aa	Known RBP	11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	KIAA0319	Q5VV43	1072 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	TPGS2	Q68CL5	300 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	OR6B2	Q6IFH4	312 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	SLC8B1	Q6J4K2	584 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	WDR93	Q6P2C0	686 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	PIGZ	Q86VD9	579 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	SIX6OS1	Q8N1H7	587 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	UBA3	Q8TBC4	463 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	HERVK_113	Q902F9	699 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	SLCO2A1	Q92959	643 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	TTPAL	Q9BTX7	342 aa		11.42	□□□□□ -0.58
ERBB4-209	ENST00000484594	CHST7	Q9NS84	486 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms